Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
CHD1O14646 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC33.74■■■□□ 2.99
CHD1O14646 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC33.74■■■□□ 2.99
CHD1O14646 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC33.74■■■□□ 2.99
CHD1O14646 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
CHD1O14646 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC33.74■■■□□ 2.99
CHD1O14646 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
CHD1O14646 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
CHD1O14646 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
CHD1O14646 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
CHD1O14646 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
CHD1O14646 TMA16-209ENST00000513272 803 ntTSL 2 BASIC33.73■■■□□ 2.99
CHD1O14646 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC33.73■■■□□ 2.99
CHD1O14646 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
CHD1O14646 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
CHD1O14646 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC33.73■■■□□ 2.99
CHD1O14646 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC33.73■■■□□ 2.99
CHD1O14646 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC33.73■■■□□ 2.99
CHD1O14646 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
CHD1O14646 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC33.73■■■□□ 2.99
CHD1O14646 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC33.73■■■□□ 2.99
CHD1O14646 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC33.73■■■□□ 2.99
CHD1O14646 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC33.73■■■□□ 2.99
CHD1O14646 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
CHD1O14646 AC087742.1-201ENST00000575880 1738 ntBASIC33.72■■■□□ 2.99
CHD1O14646 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC33.72■■■□□ 2.99
CHD1O14646 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC33.72■■■□□ 2.99
CHD1O14646 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC33.72■■■□□ 2.99
CHD1O14646 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC33.72■■■□□ 2.99
CHD1O14646 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC33.72■■■□□ 2.99
CHD1O14646 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
CHD1O14646 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC33.72■■■□□ 2.99
CHD1O14646 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC33.72■■■□□ 2.99
CHD1O14646 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC33.72■■■□□ 2.99
CHD1O14646 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC33.72■■■□□ 2.99
CHD1O14646 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
CHD1O14646 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
CHD1O14646 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
CHD1O14646 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC33.71■■■□□ 2.99
CHD1O14646 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
CHD1O14646 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC33.71■■■□□ 2.99
CHD1O14646 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC33.71■■■□□ 2.99
CHD1O14646 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC33.71■■■□□ 2.99
CHD1O14646 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
CHD1O14646 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
CHD1O14646 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC33.71■■■□□ 2.99
CHD1O14646 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
CHD1O14646 FITM1-202ENST00000559294 800 ntBASIC33.7■■■□□ 2.99
CHD1O14646 AC073195.1-201ENST00000607241 877 ntBASIC33.7■■■□□ 2.99
CHD1O14646 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
CHD1O14646 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
CHD1O14646 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC33.7■■■□□ 2.99
CHD1O14646 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC33.7■■■□□ 2.98
CHD1O14646 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC33.7■■■□□ 2.98
CHD1O14646 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC33.7■■■□□ 2.98
CHD1O14646 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC33.7■■■□□ 2.98
CHD1O14646 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC33.69■■■□□ 2.98
CHD1O14646 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
CHD1O14646 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC33.69■■■□□ 2.98
CHD1O14646 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
CHD1O14646 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
CHD1O14646 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
CHD1O14646 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
CHD1O14646 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
CHD1O14646 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC33.69■■■□□ 2.98
CHD1O14646 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
CHD1O14646 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC33.69■■■□□ 2.98
CHD1O14646 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC33.69■■■□□ 2.98
CHD1O14646 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC33.69■■■□□ 2.98
CHD1O14646 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC33.69■■■□□ 2.98
CHD1O14646 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC33.69■■■□□ 2.98
CHD1O14646 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
CHD1O14646 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
CHD1O14646 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC33.68■■■□□ 2.98
CHD1O14646 KRT18P56-201ENST00000507275 550 ntBASIC33.68■■■□□ 2.98
CHD1O14646 AL121829.2-201ENST00000620908 328 ntBASIC33.68■■■□□ 2.98
CHD1O14646 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC33.67■■■□□ 2.98
CHD1O14646 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
CHD1O14646 AL356652.1-201ENST00000615962 565 ntBASIC33.67■■■□□ 2.98
CHD1O14646 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC33.67■■■□□ 2.98
CHD1O14646 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC33.67■■■□□ 2.98
CHD1O14646 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
CHD1O14646 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
CHD1O14646 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC33.67■■■□□ 2.98
CHD1O14646 AL390719.1-204ENST00000412397 1219 ntBASIC33.67■■■□□ 2.98
CHD1O14646 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC33.67■■■□□ 2.98
CHD1O14646 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC33.67■■■□□ 2.98
CHD1O14646 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC33.67■■■□□ 2.98
CHD1O14646 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
CHD1O14646 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC33.66■■■□□ 2.98
CHD1O14646 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
CHD1O14646 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
CHD1O14646 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
CHD1O14646 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
CHD1O14646 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC33.66■■■□□ 2.98
CHD1O14646 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC33.66■■■□□ 2.98
CHD1O14646 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
CHD1O14646 AC116562.2-201ENST00000507042 360 ntBASIC33.66■■■□□ 2.98
CHD1O14646 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC33.66■■■□□ 2.98
CHD1O14646 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms