Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.49■□□□□ 0.87
COPEO14579 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.49■□□□□ 0.87
COPEO14579 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.49■□□□□ 0.87
COPEO14579 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COPEO14579 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COPEO14579 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COPEO14579 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COPEO14579 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
COPEO14579 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COPEO14579 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COPEO14579 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.48■□□□□ 0.87
COPEO14579 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPEO14579 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPEO14579 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.48■□□□□ 0.87
COPEO14579 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
COPEO14579 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPEO14579 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPEO14579 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
COPEO14579 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPEO14579 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPEO14579 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPEO14579 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPEO14579 AL136116.3-201ENST00000402907 1138 ntBASIC20.48■□□□□ 0.87
COPEO14579 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COPEO14579 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPEO14579 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPEO14579 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPEO14579 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPEO14579 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPEO14579 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
COPEO14579 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
COPEO14579 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COPEO14579 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.48■□□□□ 0.87
COPEO14579 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
COPEO14579 AC061975.6-201ENST00000579045 1553 ntBASIC20.47■□□□□ 0.87
COPEO14579 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COPEO14579 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COPEO14579 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COPEO14579 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.47■□□□□ 0.87
COPEO14579 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COPEO14579 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COPEO14579 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COPEO14579 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COPEO14579 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.47■□□□□ 0.87
COPEO14579 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
COPEO14579 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COPEO14579 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.47■□□□□ 0.87
COPEO14579 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.47■□□□□ 0.87
COPEO14579 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.47■□□□□ 0.87
COPEO14579 AC053503.5-201ENST00000601508 636 ntBASIC20.47■□□□□ 0.87
COPEO14579 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.47■□□□□ 0.87
COPEO14579 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COPEO14579 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COPEO14579 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COPEO14579 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COPEO14579 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.47■□□□□ 0.87
COPEO14579 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COPEO14579 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
COPEO14579 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COPEO14579 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.46■□□□□ 0.87
COPEO14579 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COPEO14579 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.46■□□□□ 0.87
COPEO14579 AC024257.2-201ENST00000549699 147 ntBASIC20.46■□□□□ 0.87
COPEO14579 EEF1DP3-203ENST00000566025 782 ntBASIC20.46■□□□□ 0.87
COPEO14579 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COPEO14579 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
COPEO14579 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COPEO14579 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COPEO14579 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.46■□□□□ 0.87
COPEO14579 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
COPEO14579 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COPEO14579 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPEO14579 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPEO14579 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPEO14579 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPEO14579 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPEO14579 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.45■□□□□ 0.86
COPEO14579 AC008764.7-201ENST00000593779 1081 ntBASIC20.45■□□□□ 0.86
COPEO14579 AL136162.1-201ENST00000607711 1078 ntBASIC20.45■□□□□ 0.86
COPEO14579 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COPEO14579 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPEO14579 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPEO14579 TSPY26P-201ENST00000476365 1326 ntBASIC20.45■□□□□ 0.86
COPEO14579 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.45■□□□□ 0.86
COPEO14579 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPEO14579 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.45■□□□□ 0.86
COPEO14579 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPEO14579 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
COPEO14579 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
COPEO14579 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COPEO14579 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.44■□□□□ 0.86
COPEO14579 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPEO14579 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.44■□□□□ 0.86
COPEO14579 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPEO14579 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
COPEO14579 RNF165-205ENST00000588679 2904 ntBASIC20.44■□□□□ 0.86
COPEO14579 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
COPEO14579 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COPEO14579 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPEO14579 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms