Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.09■■□□□ 1.13
SOX1O00570 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.09■■□□□ 1.13
SOX1O00570 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC22.09■■□□□ 1.13
SOX1O00570 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SOX1O00570 AC006538.3-201ENST00000612495 578 ntBASIC22.09■■□□□ 1.13
SOX1O00570 AC093458.2-201ENST00000623150 629 ntBASIC22.09■■□□□ 1.13
SOX1O00570 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.09■■□□□ 1.13
SOX1O00570 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.09■■□□□ 1.13
SOX1O00570 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.09■■□□□ 1.13
SOX1O00570 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.08■■□□□ 1.13
SOX1O00570 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
SOX1O00570 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SOX1O00570 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SOX1O00570 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.08■■□□□ 1.13
SOX1O00570 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
SOX1O00570 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
SOX1O00570 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC22.08■■□□□ 1.13
SOX1O00570 LINC01238-205ENST00000567549 1107 ntBASIC22.08■■□□□ 1.13
SOX1O00570 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SOX1O00570 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.08■■□□□ 1.12
SOX1O00570 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.12
SOX1O00570 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
SOX1O00570 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.07■■□□□ 1.12
SOX1O00570 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SOX1O00570 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SOX1O00570 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SOX1O00570 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
SOX1O00570 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SOX1O00570 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.07■■□□□ 1.12
SOX1O00570 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
SOX1O00570 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.07■■□□□ 1.12
SOX1O00570 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SOX1O00570 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SOX1O00570 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
SOX1O00570 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SOX1O00570 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.07■■□□□ 1.12
SOX1O00570 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SOX1O00570 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SOX1O00570 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SOX1O00570 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SOX1O00570 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SOX1O00570 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SOX1O00570 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SOX1O00570 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
SOX1O00570 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.06■■□□□ 1.12
SOX1O00570 AC246785.2-201ENST00000432512 513 ntBASIC22.06■■□□□ 1.12
SOX1O00570 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.06■■□□□ 1.12
SOX1O00570 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.06■■□□□ 1.12
SOX1O00570 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.06■■□□□ 1.12
SOX1O00570 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC22.06■■□□□ 1.12
SOX1O00570 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SOX1O00570 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.06■■□□□ 1.12
SOX1O00570 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.06■■□□□ 1.12
SOX1O00570 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.06■■□□□ 1.12
SOX1O00570 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOX1O00570 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOX1O00570 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOX1O00570 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOX1O00570 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOX1O00570 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
SOX1O00570 AP000593.1-201ENST00000393668 712 ntBASIC22.05■■□□□ 1.12
SOX1O00570 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOX1O00570 BX664615.1-201ENST00000443558 458 ntBASIC22.05■■□□□ 1.12
SOX1O00570 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.05■■□□□ 1.12
SOX1O00570 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.05■■□□□ 1.12
SOX1O00570 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC22.05■■□□□ 1.12
SOX1O00570 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOX1O00570 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOX1O00570 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
SOX1O00570 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOX1O00570 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SOX1O00570 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SOX1O00570 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SOX1O00570 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.04■■□□□ 1.12
SOX1O00570 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SOX1O00570 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.04■■□□□ 1.12
SOX1O00570 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.04■■□□□ 1.12
SOX1O00570 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC22.04■■□□□ 1.12
SOX1O00570 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.04■■□□□ 1.12
SOX1O00570 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.04■■□□□ 1.12
SOX1O00570 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.04■■□□□ 1.12
SOX1O00570 ECEL1P2-202ENST00000465689 757 ntBASIC22.04■■□□□ 1.12
SOX1O00570 AC116562.2-201ENST00000507042 360 ntBASIC22.04■■□□□ 1.12
SOX1O00570 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SOX1O00570 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SOX1O00570 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.04■■□□□ 1.12
SOX1O00570 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SOX1O00570 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SOX1O00570 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SOX1O00570 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SOX1O00570 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SOX1O00570 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.03■■□□□ 1.12
SOX1O00570 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SOX1O00570 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SOX1O00570 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SOX1O00570 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC22.03■■□□□ 1.12
SOX1O00570 FAM8A6P-201ENST00000407496 1135 ntBASIC22.03■■□□□ 1.12
SOX1O00570 AC117947.1-201ENST00000427448 529 ntBASIC22.03■■□□□ 1.12
SOX1O00570 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SOX1O00570 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms