Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
CHKB-CPT1BH3BT56 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 AC004408.2-201ENST00000623613 2777 ntBASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC11.45□□□□□ -0.58
CHKB-CPT1BH3BT56 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 SMG8-203ENST00000578922 2178 ntBASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CHKB-CPT1BH3BT56 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 NEFHP1-201ENST00000412845 2629 ntBASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 AC080038.3-201ENST00000623346 1952 ntBASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.43□□□□□ -0.58
CHKB-CPT1BH3BT56 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHKB-CPT1BH3BT56 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC11.42□□□□□ -0.58
CHKB-CPT1BH3BT56 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
CHKB-CPT1BH3BT56 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CHKB-CPT1BH3BT56 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC11.42□□□□□ -0.58
CHKB-CPT1BH3BT56 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms