Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SRRM3A6NNA2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.19■□□□□ 0.98
SRRM3A6NNA2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
SRRM3A6NNA2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 AC011767.1-201ENST00000617410 1153 ntBASIC21.18■□□□□ 0.98
SRRM3A6NNA2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 AP004607.4-201ENST00000530158 1459 ntBASIC21.18■□□□□ 0.98
SRRM3A6NNA2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.18■□□□□ 0.98
SRRM3A6NNA2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRRM3A6NNA2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 AC004687.1-201ENST00000579003 1625 ntBASIC21.17■□□□□ 0.98
SRRM3A6NNA2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRRM3A6NNA2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 AL121832.2-201ENST00000610979 668 ntBASIC21.16■□□□□ 0.98
SRRM3A6NNA2 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRRM3A6NNA2 AC020907.5-201ENST00000624372 1936 ntBASIC21.16■□□□□ 0.98
SRRM3A6NNA2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 AL162377.1-201ENST00000618844 1793 ntBASIC21.15■□□□□ 0.98
SRRM3A6NNA2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRRM3A6NNA2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms