Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 AC073648.6-201ENST00000641589 218 ntBASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3FA6NER0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 GCSHP5-201ENST00000443090 522 ntBASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 AP006294.2-201ENST00000641667 209 ntBASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D3FA6NER0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 PGM5P4-201ENST00000421970 445 ntBASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 UNC93B4-201ENST00000505679 747 ntBASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 AC008403.3-201ENST00000598924 454 ntBASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TBC1D3FA6NER0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 AC087633.2-202ENST00000565166 1439 ntBASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 AC244015.2-201ENST00000616358 1861 ntBASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 FBXW4P1-201ENST00000426721 2239 ntBASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TBC1D3FA6NER0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.45■□□□□ 0.87
TBC1D3FA6NER0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 C2orf69P4-201ENST00000565394 541 ntBASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TBC1D3FA6NER0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D3FA6NER0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.44■□□□□ 0.86
TBC1D3FA6NER0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D3FA6NER0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.44■□□□□ 0.86
TBC1D3FA6NER0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D3FA6NER0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D3FA6NER0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D3FA6NER0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D3FA6NER0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms