Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
HFM1A2PYH4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
HFM1A2PYH4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
HFM1A2PYH4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
HFM1A2PYH4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC30.55■■■□□ 2.48
HFM1A2PYH4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC30.55■■■□□ 2.48
HFM1A2PYH4 AC060766.5-201ENST00000590539 871 ntBASIC30.55■■■□□ 2.48
HFM1A2PYH4 HLA-B-256ENST00000639848 1089 ntBASIC30.55■■■□□ 2.48
HFM1A2PYH4 AC066615.1-201ENST00000640911 628 ntBASIC30.55■■■□□ 2.48
HFM1A2PYH4 PLK5-205ENST00000642079 1969 ntBASIC30.54■■■□□ 2.48
HFM1A2PYH4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
HFM1A2PYH4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
HFM1A2PYH4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
HFM1A2PYH4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
HFM1A2PYH4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC30.54■■■□□ 2.48
HFM1A2PYH4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC30.54■■■□□ 2.48
HFM1A2PYH4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
HFM1A2PYH4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
HFM1A2PYH4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
HFM1A2PYH4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC30.53■■■□□ 2.48
HFM1A2PYH4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
HFM1A2PYH4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC30.53■■■□□ 2.48
HFM1A2PYH4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
HFM1A2PYH4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
HFM1A2PYH4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC30.53■■■□□ 2.48
HFM1A2PYH4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
HFM1A2PYH4 AC121338.2-201ENST00000622535 1744 ntBASIC30.53■■■□□ 2.48
HFM1A2PYH4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
HFM1A2PYH4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC30.53■■■□□ 2.48
HFM1A2PYH4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC30.53■■■□□ 2.48
HFM1A2PYH4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC30.52■■■□□ 2.48
HFM1A2PYH4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
HFM1A2PYH4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC30.52■■■□□ 2.48
HFM1A2PYH4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
HFM1A2PYH4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
HFM1A2PYH4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC30.52■■■□□ 2.48
HFM1A2PYH4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC30.52■■■□□ 2.48
HFM1A2PYH4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC30.52■■■□□ 2.48
HFM1A2PYH4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
HFM1A2PYH4 KRT8P36-201ENST00000489121 1440 ntBASIC30.52■■■□□ 2.48
HFM1A2PYH4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
HFM1A2PYH4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC30.52■■■□□ 2.48
HFM1A2PYH4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
HFM1A2PYH4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
HFM1A2PYH4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC30.51■■■□□ 2.47
HFM1A2PYH4 UNC93B5-201ENST00000530315 699 ntBASIC30.51■■■□□ 2.47
HFM1A2PYH4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC30.51■■■□□ 2.47
HFM1A2PYH4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC30.51■■■□□ 2.47
HFM1A2PYH4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
HFM1A2PYH4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
HFM1A2PYH4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
HFM1A2PYH4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
HFM1A2PYH4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
HFM1A2PYH4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
HFM1A2PYH4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC30.5■■■□□ 2.47
HFM1A2PYH4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
HFM1A2PYH4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC30.5■■■□□ 2.47
HFM1A2PYH4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC30.5■■■□□ 2.47
HFM1A2PYH4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
HFM1A2PYH4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
HFM1A2PYH4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC30.5■■■□□ 2.47
HFM1A2PYH4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC30.5■■■□□ 2.47
HFM1A2PYH4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
HFM1A2PYH4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC30.49■■■□□ 2.47
HFM1A2PYH4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
HFM1A2PYH4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
HFM1A2PYH4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
HFM1A2PYH4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
HFM1A2PYH4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
HFM1A2PYH4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
HFM1A2PYH4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
HFM1A2PYH4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
HFM1A2PYH4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC30.49■■■□□ 2.47
HFM1A2PYH4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC30.49■■■□□ 2.47
HFM1A2PYH4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
HFM1A2PYH4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
HFM1A2PYH4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC30.48■■■□□ 2.47
HFM1A2PYH4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC30.48■■■□□ 2.47
HFM1A2PYH4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
HFM1A2PYH4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
HFM1A2PYH4 SLC29A4P2-201ENST00000504749 1089 ntBASIC30.48■■■□□ 2.47
HFM1A2PYH4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
HFM1A2PYH4 C2orf69P4-201ENST00000565394 541 ntBASIC30.48■■■□□ 2.47
HFM1A2PYH4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC30.48■■■□□ 2.47
HFM1A2PYH4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
HFM1A2PYH4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
HFM1A2PYH4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC30.48■■■□□ 2.47
HFM1A2PYH4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
HFM1A2PYH4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
HFM1A2PYH4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC30.47■■■□□ 2.47
HFM1A2PYH4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
HFM1A2PYH4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC30.47■■■□□ 2.47
HFM1A2PYH4 HES2-205ENST00000487437 968 ntTSL 3 BASIC30.47■■■□□ 2.47
HFM1A2PYH4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
HFM1A2PYH4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
HFM1A2PYH4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
HFM1A2PYH4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
HFM1A2PYH4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
HFM1A2PYH4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
HFM1A2PYH4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms