Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 KRT87P-202ENST00000534226 1464 ntBASIC13.99□□□□□ -0.17
LINC00959A0A1B0GUT2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00959A0A1B0GUT2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00959A0A1B0GUT2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00959A0A1B0GUT2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 SUDS3P1-201ENST00000505831 966 ntBASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00959A0A1B0GUT2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 AC120498.10-201ENST00000621827 505 ntBASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 AL512408.1-201ENST00000569378 2000 ntBASIC13.97□□□□□ -0.17
LINC00959A0A1B0GUT2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 AL162377.1-201ENST00000618844 1793 ntBASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 PCDHAC2-203ENST00000615316 3011 ntBASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 AC245052.3-201ENST00000450182 901 ntBASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LINC00959A0A1B0GUT2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
LINC00959A0A1B0GUT2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00959A0A1B0GUT2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00959A0A1B0GUT2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 AC092720.2-201ENST00000602388 1665 ntBASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 AC138907.5-202ENST00000569484 235 ntBASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 MIR6084-201ENST00000622012 110 ntBASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 KRT16P2-201ENST00000414673 1423 ntBASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00959A0A1B0GUT2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00959A0A1B0GUT2 AIRN-201ENST00000601203 4374 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms