Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AC027702.1-201ENST00000563810 1770 ntBASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AC138907.5-202ENST00000569484 235 ntBASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AC061975.6-201ENST00000579045 1553 ntBASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AL031432.3-201ENST00000607698 485 ntBASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AC245052.3-201ENST00000450182 901 ntBASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AC110285.6-201ENST00000617652 491 ntBASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV7-9A0A0J9YWB2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SUDS3P1-201ENST00000505831 966 ntBASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AC079140.4-201ENST00000507448 529 ntBASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
TRBV7-9A0A0J9YWB2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV7-9A0A0J9YWB2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV7-9A0A0J9YWB2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AL162377.1-201ENST00000618844 1793 ntBASIC15.27■□□□□ 0.04
TRBV7-9A0A0J9YWB2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV7-9A0A0J9YWB2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.27■□□□□ 0.04
TRBV7-9A0A0J9YWB2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRBV7-9A0A0J9YWB2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRBV7-9A0A0J9YWB2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TRBV7-9A0A0J9YWB2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.27■□□□□ 0.03
TRBV7-9A0A0J9YWB2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV7-9A0A0J9YWB2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV7-9A0A0J9YWB2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV7-9A0A0J9YWB2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV7-9A0A0J9YWB2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV7-9A0A0J9YWB2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV7-9A0A0J9YWB2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV7-9A0A0J9YWB2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV7-9A0A0J9YWB2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms