Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 HMGCLL1-201ENST00000274901 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 OR52K1-201ENST00000307632 1030 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 IL2RA-202ENST00000379954 1562 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 KRTAP9-6-201ENST00000391355 1303 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 NDUFA3-202ENST00000391762 435 ntTSL 5 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 PSMC1P9-201ENST00000396338 1335 ntBASIC9.69□□□□□ -0.86
LMO3Q8TAP4 FANCB-202ENST00000398334 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 LINC00423-201ENST00000421002 903 ntTSL 5 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AP000532.1-201ENST00000440999 177 ntBASIC9.69□□□□□ -0.86
LMO3Q8TAP4 ABCA11P-201ENST00000451020 1815 ntTSL 2 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 HEPACAM2-204ENST00000453812 1869 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 DNAJC9-AS1-202ENST00000457147 762 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 NBPF6-202ENST00000495380 2494 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 ZBED5-AS1-201ENST00000501079 1071 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 PDLIM5-207ENST00000503974 2081 ntTSL 2 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 MALAT1-201ENST00000508832 1519 ntTSL 2 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 NBPF22P-201ENST00000508988 1143 ntBASIC9.69□□□□□ -0.86
LMO3Q8TAP4 TMEM150C-204ENST00000515780 3296 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 ASPH-225ENST00000522835 1258 ntTSL 2 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 GLYATL1P3-201ENST00000527482 909 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AP001999.3-201ENST00000529922 455 ntTSL 2 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 KCTD21-AS1-205ENST00000530261 910 ntTSL 4 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AP000866.3-201ENST00000534607 433 ntBASIC9.69□□□□□ -0.86
LMO3Q8TAP4 PSMA5-206ENST00000538610 1504 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AC100826.1-201ENST00000558010 890 ntTSL 2 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 BMS1P1-202ENST00000580094 4294 ntTSL 5 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AC037487.1-201ENST00000583416 2474 ntTSL 5 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 ZNF799-204ENST00000595766 576 ntTSL 4 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 ZNF675-207ENST00000600313 543 ntTSL 4 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AC063977.1-201ENST00000600623 371 ntBASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AP000962.1-201ENST00000602654 729 ntTSL 5 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AC091614.1-201ENST00000606898 879 ntTSL 3 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 uc_338.30-201ENST00000612038 168 ntBASIC9.69□□□□□ -0.86
LMO3Q8TAP4 MIR6776-201ENST00000616678 59 ntBASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AC141557.2-201ENST00000621330 482 ntBASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AC011840.6-201ENST00000624536 610 ntBASIC9.69□□□□□ -0.86
LMO3Q8TAP4 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AC023824.7-201ENST00000623041 5731 ntBASIC9.69□□□□□ -0.86
LMO3Q8TAP4 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 TFCP2L1-201ENST00000263707 9292 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 DLEU1-212ENST00000469754 2955 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 KCNH5-204ENST00000420622 2711 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 TCF4-224ENST00000564403 2696 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 CARD8-216ENST00000520153 2617 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 AL445665.1-201ENST00000322495 2599 ntTSL 2 BASIC9.69□□□□□ -0.86
LMO3Q8TAP4 UAP1-202ENST00000367924 2066 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 NPC2-203ENST00000541064 1436 ntTSL 2 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 GUCY1A3-208ENST00000511507 2552 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 LYG1-201ENST00000308528 990 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 AZI2-202ENST00000334100 943 ntTSL 3 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 FAM213AP1-201ENST00000418757 668 ntBASIC9.68□□□□□ -0.86
LMO3Q8TAP4 AC004920.1-201ENST00000422831 482 ntTSL 3 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 AL133410.1-202ENST00000431981 472 ntTSL 3 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 MRPS25-205ENST00000449354 1119 ntTSL 2 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 RN7SL749P-201ENST00000460421 290 ntBASIC9.68□□□□□ -0.86
LMO3Q8TAP4 AF241726.2-201ENST00000465127 954 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 GPN1-209ENST00000503738 984 ntTSL 5 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 EGFLAM-207ENST00000506135 889 ntTSL 3 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 AP000867.1-201ENST00000511464 255 ntBASIC9.68□□□□□ -0.86
LMO3Q8TAP4 AC004147.5-201ENST00000581727 536 ntBASIC9.68□□□□□ -0.86
LMO3Q8TAP4 BRCA1-226ENST00000591534 1282 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 AC007336.2-201ENST00000611626 557 ntBASIC9.68□□□□□ -0.86
LMO3Q8TAP4 AL354740.1-202ENST00000612837 290 ntTSL 3 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 AC002401.3-201ENST00000620020 440 ntBASIC9.68□□□□□ -0.86
LMO3Q8TAP4 LINC01320-209ENST00000625995 928 ntTSL 5 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 NF1P9-202ENST00000629550 966 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 AL157371.2-201ENST00000637813 480 ntTSL 4 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 GRIA1-202ENST00000340592 3170 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 AL353132.1-201ENST00000415260 2043 ntBASIC9.68□□□□□ -0.86
LMO3Q8TAP4 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 GNG2-201ENST00000335281 3729 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 SPIN3-205ENST00000638289 4614 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 SLC17A1-201ENST00000244527 1844 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 POLR2D-203ENST00000409955 1758 ntTSL 2 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 AC011815.1-201ENST00000586922 4382 ntTSL 2 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
LMO3Q8TAP4 ZBTB14-207ENST00000614697 3341 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 AC004158.1-202ENST00000624327 1645 ntTSL 2 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 NLRP10-201ENST00000328600 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 SCIMP-203ENST00000574081 2383 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC9.67□□□□□ -0.86
LMO3Q8TAP4 CCR4-201ENST00000330953 3095 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms