Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 AC125618.1-201ENST00000472596 563 ntTSL 4 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 AC114744.1-201ENST00000498116 666 ntBASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 AC099509.2-201ENST00000513926 406 ntTSL 3 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 IGLV3-29-201ENST00000520084 244 ntBASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 CCNC-215ENST00000523799 1035 ntTSL 3 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 OR2AL1P-201ENST00000529862 507 ntBASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 GSG1-206ENST00000537302 1028 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 IGFL1P2-201ENST00000593820 330 ntBASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 AL121830.1-203ENST00000598694 701 ntTSL 5 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 ZNF880-206ENST00000600321 953 ntTSL 2 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 AC083798.2-203ENST00000608346 564 ntTSL 2 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 FAM238B-204ENST00000612040 423 ntBASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 MIR6762-201ENST00000613340 86 ntBASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 SMG6-IT1-201ENST00000624930 374 ntBASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 AC078776.2-201ENST00000641021 285 ntBASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 ELOC-202ENST00000518127 1943 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 SETD4-206ENST00000399212 3258 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 FCAMR-201ENST00000324852 2605 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 EDA-213ENST00000616899 4643 ntTSL 5 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 STAG1-210ENST00000629124 4322 ntTSL 5 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 CPEB1-207ENST00000611031 3074 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 AIMP1-201ENST00000358008 2412 ntAPPRIS P3 TSL 2 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 EFCAB13-203ENST00000517484 3466 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 LY9-203ENST00000368037 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 CDC25C-201ENST00000323760 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SYCE2Q6PIF2 OGDHL-201ENST00000374103 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 SLC12A8-201ENST00000393469 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 TACC2-203ENST00000358010 3815 ntTSL 5 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 HARS-208ENST00000504366 3494 ntTSL 2 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 SSPN-202ENST00000422622 4348 ntTSL 2 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 NLRP1-216ENST00000617618 4788 ntAPPRIS P4 TSL 5 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 FGF13-205ENST00000441825 1625 ntTSL 5 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 SH3TC2-215ENST00000515425 4059 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 AF111167.2-201ENST00000560419 4059 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 TRAK2-201ENST00000332624 6510 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 MADD-205ENST00000395344 4988 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 CES5A-203ENST00000518005 2092 ntTSL 2 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 CES5A-208ENST00000541580 1669 ntTSL 5 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 TNFAIP8-201ENST00000274456 795 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 FCAR-207ENST00000391725 830 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 GAPDHP72-201ENST00000402643 1010 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 RPSAP63-201ENST00000412013 888 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 ZRANB2-AS2-202ENST00000413421 826 ntTSL 3 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 AC074033.1-201ENST00000418623 410 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 LENG8-AS1-202ENST00000429922 871 ntTSL 4 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 RFTN1P1-201ENST00000442584 1033 ntTSL 5 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 GAPDHP52-201ENST00000449535 942 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 AC104843.1-201ENST00000451203 319 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 SLC17A1-203ENST00000468082 1242 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 AC020658.1-201ENST00000471253 938 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 AC016546.1-201ENST00000473590 463 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 SEM1-210ENST00000488005 775 ntTSL 2 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 FXYD6P3-201ENST00000495569 285 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 TRIM6-211ENST00000515022 1060 ntTSL 2 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 AC007406.2-201ENST00000540868 503 ntTSL 5 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 VWA3A-205ENST00000563755 861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 MIR4269-201ENST00000578705 84 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 RN7SKP4-201ENST00000606815 322 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 AL592227.1-201ENST00000614748 126 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 uc_338.33-201ENST00000614988 170 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 EYA3-201ENST00000373863 1729 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 PRMT3-203ENST00000437750 1736 ntTSL 2 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 AC118282.4-201ENST00000623090 1712 ntBASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 NFYC-201ENST00000308733 2158 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 GRIA1-201ENST00000285900 5708 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 OVGP1-201ENST00000369732 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 SPATA22-209ENST00000572969 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 ZNF43-202ENST00000357491 5249 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 CR786580.1-201ENST00000417843 2878 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 LINC01410-201ENST00000424345 2877 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 CSF2RA-209ENST00000432318 1940 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 SPTAN1-201ENST00000358161 7794 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 CLDN2-202ENST00000540876 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 AP003352.1-201ENST00000501016 1989 ntTSL 5 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 MTO1-201ENST00000370300 2961 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 POLR1A-203ENST00000409681 6454 ntTSL 5 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 ADGRG1-216ENST00000562631 4042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYCE2Q6PIF2 TMEM196-202ENST00000405844 4054 ntTSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms