Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 RN7SL724P-201ENST00000461895 271 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC117382.1-201ENST00000468074 730 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 APOPT1-206ENST00000476323 757 ntTSL 5 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 RPL7AP8-201ENST00000481963 804 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC091805.1-201ENST00000498395 342 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC098679.3-203ENST00000514881 919 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 MSRA-205ENST00000518255 674 ntTSL 5 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC002070.1-201ENST00000537366 693 ntTSL 3 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC055716.3-201ENST00000547533 761 ntTSL 3 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC079907.2-201ENST00000550307 1034 ntTSL 3 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 TMEM170A-204ENST00000567796 734 ntTSL 5 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC010542.2-201ENST00000568560 511 ntTSL 5 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 RN7SL531P-201ENST00000578464 282 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC013290.1-201ENST00000586960 537 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 TEX26-AS1-210ENST00000588726 841 ntTSL 5 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC016629.3-201ENST00000596029 519 ntTSL 3 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC019322.2-201ENST00000605634 147 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC079766.1-201ENST00000608774 427 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 BSNDP1-201ENST00000613026 367 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AL009172.2-201ENST00000638776 717 ntTSL 5 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC005176.1-201ENST00000594263 1831 ntTSL 2 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 TCF4-240ENST00000568673 2398 ntTSL 5 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC005005.3-201ENST00000609017 1410 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 ZNF148-207ENST00000492394 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 TRIM55-201ENST00000276573 1960 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC012085.2-201ENST00000550287 1587 ntTSL 2 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC027045.2-201ENST00000634974 1571 ntTSL 5 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 TSNAX-201ENST00000366639 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 SP1-201ENST00000327443 2846 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 KRIT1-202ENST00000394503 2827 ntTSL 2 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 ABCB4-206ENST00000453593 3699 ntTSL 5 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 ZNF226-202ENST00000337433 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC209007.1-201ENST00000401075 1342 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 CD302-204ENST00000553424 3866 ntTSL 2 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 ADGRG5-201ENST00000340339 3767 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 CSMD2-203ENST00000373377 3212 ntTSL 2 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 TTLL6-205ENST00000433608 2548 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 NPHP1-207ENST00000445609 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 LINC02011-201ENST00000566553 3830 ntTSL 2 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 DBF4B-201ENST00000315005 2997 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 PSG5-205ENST00000404580 2145 ntTSL 2 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 ANP32E-208ENST00000583931 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AL031595.3-201ENST00000624919 14262 ntBASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 C10orf82-201ENST00000369210 994 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 Z83838.1-201ENST00000431036 925 ntBASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 RPL23P4-201ENST00000442836 416 ntBASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 IFNA13-201ENST00000449498 634 ntAPPRIS ALT1 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AC092610.1-201ENST00000454916 373 ntBASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AC005020.1-201ENST00000455459 526 ntBASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AC093627.5-201ENST00000462565 662 ntTSL 3 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 RPARP-AS1-203ENST00000494270 711 ntTSL 2 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 ABLIM3-205ENST00000504238 2774 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 TMEM161B-207ENST00000509387 963 ntTSL 2 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 RNU1-125P-201ENST00000516752 129 ntBASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 COX6C-202ENST00000517682 429 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AP000879.1-201ENST00000526174 976 ntTSL 5 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 CDK2AP1-206ENST00000544658 931 ntTSL 2 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AL807752.5-201ENST00000569497 820 ntBASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AFMID-214ENST00000591952 582 ntTSL 2 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 RN7SKP4-201ENST00000606815 322 ntBASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AC245595.2-202ENST00000611488 1197 ntBASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AL354809.1-202ENST00000614005 640 ntTSL 3 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 HIST1H4D-201ENST00000614247 312 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AL354809.1-201ENST00000618106 716 ntTSL 3 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AL139351.1-201ENST00000622092 320 ntBASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AP001206.1-201ENST00000635554 720 ntBASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AC132825.5-201ENST00000640603 310 ntBASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 CRX-207ENST00000613299 4193 ntTSL 3 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 CALCOCO1-210ENST00000548263 3888 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 SS18-203ENST00000415083 3414 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 CASP8-201ENST00000264274 2540 ntTSL 5 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 TBPL1-201ENST00000237264 4228 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 SERPINB3-201ENST00000283752 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 TCEANC2-203ENST00000391366 1783 ntBASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 CFAP161-201ENST00000286732 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 CAMK2D-203ENST00000379773 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 MCOLN2-202ENST00000370608 2871 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 MUSK-201ENST00000189978 2408 ntTSL 5 BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 MUSK-204ENST00000374440 2408 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 ZBTB20-203ENST00000462705 3740 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 CENPL-201ENST00000345664 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 AC008764.10-201ENST00000625135 1830 ntBASIC8.5□□□□□ -1.05
NPIPA3F8WFD2 ITGA6-207ENST00000458358 3261 ntTSL 5 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 RFX3-201ENST00000302303 1522 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 RACGAP1-209ENST00000547905 2190 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 SCIMP-202ENST00000571800 2155 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 AJ003147.3-201ENST00000622989 2199 ntBASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms