Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 MIR6821-201ENST00000617625 74 ntBASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 FEM1AP1-201ENST00000431297 1995 ntBASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA11Q9Y5H2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.78
PCDHGA11Q9Y5H2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PCDHGA11Q9Y5H2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA11Q9Y5H2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA11Q9Y5H2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA11Q9Y5H2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA11Q9Y5H2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA11Q9Y5H2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHGA11Q9Y5H2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHGA11Q9Y5H2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA11Q9Y5H2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA11Q9Y5H2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PCDHGA11Q9Y5H2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGA11Q9Y5H2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDHGA11Q9Y5H2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 NTF6G-201ENST00000591094 616 ntBASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 AC243732.1-201ENST00000612648 864 ntBASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA11Q9Y5H2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHGA11Q9Y5H2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGA11Q9Y5H2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGA11Q9Y5H2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA11Q9Y5H2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGA11Q9Y5H2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGA11Q9Y5H2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.86■□□□□ 0.77
PCDHGA11Q9Y5H2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms