Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSR3Q9UNL2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 HSD17B1P1-201ENST00000590052 955 ntBASIC18.32■□□□□ 0.52
SSR3Q9UNL2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.32■□□□□ 0.52
SSR3Q9UNL2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 HCG11-201ENST00000411553 5696 ntBASIC18.31■□□□□ 0.52
SSR3Q9UNL2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 TCF3P1-201ENST00000423021 1937 ntBASIC18.31■□□□□ 0.52
SSR3Q9UNL2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SSR3Q9UNL2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR3Q9UNL2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 AC006455.2-201ENST00000429931 906 ntBASIC18.29■□□□□ 0.52
SSR3Q9UNL2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SSR3Q9UNL2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
SSR3Q9UNL2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SSR3Q9UNL2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms