Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX6Q9UNH7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX6Q9UNH7 AC092667.1-201ENST00000434301 2586 ntBASIC19.86■□□□□ 0.77
SNX6Q9UNH7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX6Q9UNH7 AC027702.1-201ENST00000563810 1770 ntBASIC19.85■□□□□ 0.77
SNX6Q9UNH7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SNX6Q9UNH7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX6Q9UNH7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX6Q9UNH7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX6Q9UNH7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SNX6Q9UNH7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNX6Q9UNH7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SNX6Q9UNH7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.85■□□□□ 0.77
SNX6Q9UNH7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX6Q9UNH7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX6Q9UNH7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNX6Q9UNH7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
SNX6Q9UNH7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.85■□□□□ 0.77
SNX6Q9UNH7 AC004854.2-201ENST00000608450 1441 ntBASIC19.85■□□□□ 0.77
SNX6Q9UNH7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 AC116050.2-201ENST00000612102 1779 ntBASIC19.84■□□□□ 0.77
SNX6Q9UNH7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 AC020907.5-201ENST00000624372 1936 ntBASIC19.84■□□□□ 0.77
SNX6Q9UNH7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX6Q9UNH7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX6Q9UNH7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.83■□□□□ 0.77
SNX6Q9UNH7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX6Q9UNH7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
SNX6Q9UNH7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.83■□□□□ 0.77
SNX6Q9UNH7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX6Q9UNH7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX6Q9UNH7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SNX6Q9UNH7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX6Q9UNH7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX6Q9UNH7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SNX6Q9UNH7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX6Q9UNH7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SNX6Q9UNH7 RNF165-205ENST00000588679 2904 ntBASIC19.82■□□□□ 0.76
SNX6Q9UNH7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 KRT19P1-201ENST00000405746 1186 ntBASIC19.82■□□□□ 0.76
SNX6Q9UNH7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SNX6Q9UNH7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms