Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBP1Q9NZI7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
UBP1Q9NZI7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBP1Q9NZI7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
UBP1Q9NZI7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
UBP1Q9NZI7 AC091799.1-201ENST00000422823 811 ntBASIC20.93■□□□□ 0.94
UBP1Q9NZI7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
UBP1Q9NZI7 AC092667.1-201ENST00000434301 2586 ntBASIC20.93■□□□□ 0.94
UBP1Q9NZI7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBP1Q9NZI7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
UBP1Q9NZI7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBP1Q9NZI7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBP1Q9NZI7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBP1Q9NZI7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBP1Q9NZI7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
UBP1Q9NZI7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 LINC01006-201ENST00000333319 2292 ntBASIC20.92■□□□□ 0.94
UBP1Q9NZI7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 AC022517.1-201ENST00000592429 346 ntBASIC20.92■□□□□ 0.94
UBP1Q9NZI7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 AC011767.1-201ENST00000617410 1153 ntBASIC20.92■□□□□ 0.94
UBP1Q9NZI7 AC010536.3-201ENST00000620306 533 ntBASIC20.92■□□□□ 0.94
UBP1Q9NZI7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 AC116050.2-201ENST00000612102 1779 ntBASIC20.92■□□□□ 0.94
UBP1Q9NZI7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 FEM1AP1-201ENST00000431297 1995 ntBASIC20.92■□□□□ 0.94
UBP1Q9NZI7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBP1Q9NZI7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBP1Q9NZI7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBP1Q9NZI7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.91■□□□□ 0.94
UBP1Q9NZI7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
UBP1Q9NZI7 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.91■□□□□ 0.94
UBP1Q9NZI7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.91■□□□□ 0.94
UBP1Q9NZI7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBP1Q9NZI7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
UBP1Q9NZI7 AC007225.1-201ENST00000566331 1836 ntBASIC20.91■□□□□ 0.94
UBP1Q9NZI7 AC243732.1-201ENST00000612648 864 ntBASIC20.91■□□□□ 0.94
UBP1Q9NZI7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.91■□□□□ 0.94
UBP1Q9NZI7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBP1Q9NZI7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 MFSD11-216ENST00000590393 1141 ntBASIC20.9■□□□□ 0.94
UBP1Q9NZI7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBP1Q9NZI7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
UBP1Q9NZI7 AC073314.1-201ENST00000568729 2216 ntBASIC20.89■□□□□ 0.94
UBP1Q9NZI7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
UBP1Q9NZI7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.89■□□□□ 0.94
UBP1Q9NZI7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 AC006015.1-201ENST00000429970 570 ntBASIC20.89■□□□□ 0.93
UBP1Q9NZI7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms