Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TFCP2L1Q9NZI6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TFCP2L1Q9NZI6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
TFCP2L1Q9NZI6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TFCP2L1Q9NZI6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TFCP2L1Q9NZI6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TFCP2L1Q9NZI6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
TFCP2L1Q9NZI6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC26.28■■□□□ 1.8
TFCP2L1Q9NZI6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TFCP2L1Q9NZI6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TFCP2L1Q9NZI6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TFCP2L1Q9NZI6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.28■■□□□ 1.8
TFCP2L1Q9NZI6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TFCP2L1Q9NZI6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC26.28■■□□□ 1.8
TFCP2L1Q9NZI6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.28■■□□□ 1.8
TFCP2L1Q9NZI6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TFCP2L1Q9NZI6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TFCP2L1Q9NZI6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
TFCP2L1Q9NZI6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC26.27■■□□□ 1.8
TFCP2L1Q9NZI6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC26.27■■□□□ 1.8
TFCP2L1Q9NZI6 AC145285.6-201ENST00000604632 637 ntBASIC26.27■■□□□ 1.8
TFCP2L1Q9NZI6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.27■■□□□ 1.8
TFCP2L1Q9NZI6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TFCP2L1Q9NZI6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
TFCP2L1Q9NZI6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
TFCP2L1Q9NZI6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.26■■□□□ 1.79
TFCP2L1Q9NZI6 AC093323.1-202ENST00000635031 2045 ntBASIC26.26■■□□□ 1.79
TFCP2L1Q9NZI6 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.26■■□□□ 1.79
TFCP2L1Q9NZI6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
TFCP2L1Q9NZI6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TFCP2L1Q9NZI6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TFCP2L1Q9NZI6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
TFCP2L1Q9NZI6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TFCP2L1Q9NZI6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TFCP2L1Q9NZI6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC26.26■■□□□ 1.79
TFCP2L1Q9NZI6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC26.26■■□□□ 1.79
TFCP2L1Q9NZI6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC26.26■■□□□ 1.79
TFCP2L1Q9NZI6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TFCP2L1Q9NZI6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC26.25■■□□□ 1.79
TFCP2L1Q9NZI6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TFCP2L1Q9NZI6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TFCP2L1Q9NZI6 AC005521.1-201ENST00000393351 872 ntBASIC26.25■■□□□ 1.79
TFCP2L1Q9NZI6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TFCP2L1Q9NZI6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC26.25■■□□□ 1.79
TFCP2L1Q9NZI6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC26.25■■□□□ 1.79
TFCP2L1Q9NZI6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC26.25■■□□□ 1.79
TFCP2L1Q9NZI6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.25■■□□□ 1.79
TFCP2L1Q9NZI6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TFCP2L1Q9NZI6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TFCP2L1Q9NZI6 AL390719.1-204ENST00000412397 1219 ntBASIC26.24■■□□□ 1.79
TFCP2L1Q9NZI6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC26.24■■□□□ 1.79
TFCP2L1Q9NZI6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC26.24■■□□□ 1.79
TFCP2L1Q9NZI6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TFCP2L1Q9NZI6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC26.24■■□□□ 1.79
TFCP2L1Q9NZI6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC26.24■■□□□ 1.79
TFCP2L1Q9NZI6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
TFCP2L1Q9NZI6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
TFCP2L1Q9NZI6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.24■■□□□ 1.79
TFCP2L1Q9NZI6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TFCP2L1Q9NZI6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 NME3-204ENST00000563498 920 ntTSL 2 BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 AF186192.3-201ENST00000583427 947 ntBASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TFCP2L1Q9NZI6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.22■■□□□ 1.79
TFCP2L1Q9NZI6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms