Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
HCFC1R1Q9NWW0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC1R1Q9NWW0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC1R1Q9NWW0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC1R1Q9NWW0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.48■■□□□ 1.03
HCFC1R1Q9NWW0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC1R1Q9NWW0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.48■■□□□ 1.03
HCFC1R1Q9NWW0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC1R1Q9NWW0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
HCFC1R1Q9NWW0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC1R1Q9NWW0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC1R1Q9NWW0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
HCFC1R1Q9NWW0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
HCFC1R1Q9NWW0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
HCFC1R1Q9NWW0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
HCFC1R1Q9NWW0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.45■■□□□ 1.02
HCFC1R1Q9NWW0 MIR718-201ENST00000390190 70 ntBASIC21.45■■□□□ 1.02
HCFC1R1Q9NWW0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC1R1Q9NWW0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.45■■□□□ 1.02
HCFC1R1Q9NWW0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.45■■□□□ 1.02
HCFC1R1Q9NWW0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.45■■□□□ 1.02
HCFC1R1Q9NWW0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.45■■□□□ 1.02
HCFC1R1Q9NWW0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC1R1Q9NWW0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC1R1Q9NWW0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 MIR4497-201ENST00000583208 89 ntBASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.44■■□□□ 1.02
HCFC1R1Q9NWW0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 SNORA78-201ENST00000459373 127 ntBASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 AC006557.6-201ENST00000623071 864 ntBASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HCFC1R1Q9NWW0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HCFC1R1Q9NWW0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms