Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 MCRIP2P1-201ENST00000394346 511 ntBASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 GUSBP6-202ENST00000438529 1198 ntBASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM248Q9NWD8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM248Q9NWD8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.06■□□□□ 0.96
TMEM248Q9NWD8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM248Q9NWD8 MKRN4P-201ENST00000444706 1521 ntBASIC21.06■□□□□ 0.96
TMEM248Q9NWD8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM248Q9NWD8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.06■□□□□ 0.96
TMEM248Q9NWD8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.06■□□□□ 0.96
TMEM248Q9NWD8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM248Q9NWD8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM248Q9NWD8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 TSPY6P-201ENST00000448518 926 ntBASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEM248Q9NWD8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 CYP2T3P-201ENST00000601990 817 ntBASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 AC087633.2-202ENST00000565166 1439 ntBASIC21.04■□□□□ 0.96
TMEM248Q9NWD8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 AC104771.1-201ENST00000603335 964 ntBASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 AL109923.1-201ENST00000618799 583 ntBASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 MIR2861-201ENST00000636310 90 ntBASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM248Q9NWD8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM248Q9NWD8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.02■□□□□ 0.96
TMEM248Q9NWD8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.02■□□□□ 0.96
TMEM248Q9NWD8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM248Q9NWD8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM248Q9NWD8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM248Q9NWD8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.02■□□□□ 0.96
TMEM248Q9NWD8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms