Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATAD3AQ9NVI7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.65■□□□□ 0.74
ATAD3AQ9NVI7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATAD3AQ9NVI7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATAD3AQ9NVI7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATAD3AQ9NVI7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATAD3AQ9NVI7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATAD3AQ9NVI7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATAD3AQ9NVI7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATAD3AQ9NVI7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.64■□□□□ 0.73
ATAD3AQ9NVI7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATAD3AQ9NVI7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATAD3AQ9NVI7 AC138907.5-202ENST00000569484 235 ntBASIC19.64■□□□□ 0.73
ATAD3AQ9NVI7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.64■□□□□ 0.73
ATAD3AQ9NVI7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATAD3AQ9NVI7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATAD3AQ9NVI7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.64■□□□□ 0.73
ATAD3AQ9NVI7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATAD3AQ9NVI7 AC011484.1-201ENST00000377652 1995 ntBASIC19.64■□□□□ 0.73
ATAD3AQ9NVI7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATAD3AQ9NVI7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATAD3AQ9NVI7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 LINC02228-203ENST00000641970 1355 ntBASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATAD3AQ9NVI7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 GABARAPL3-202ENST00000624044 1851 ntBASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 KRT16P2-201ENST00000414673 1423 ntBASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 AC007225.1-201ENST00000566331 1836 ntBASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATAD3AQ9NVI7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.61■□□□□ 0.73
ATAD3AQ9NVI7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.61■□□□□ 0.73
ATAD3AQ9NVI7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATAD3AQ9NVI7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATAD3AQ9NVI7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATAD3AQ9NVI7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.61■□□□□ 0.73
ATAD3AQ9NVI7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.61■□□□□ 0.73
ATAD3AQ9NVI7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATAD3AQ9NVI7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.61■□□□□ 0.73
ATAD3AQ9NVI7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.61■□□□□ 0.73
ATAD3AQ9NVI7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATAD3AQ9NVI7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
ATAD3AQ9NVI7 AP005212.1-201ENST00000581547 1997 ntBASIC19.61■□□□□ 0.73
ATAD3AQ9NVI7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 AC245052.3-201ENST00000450182 901 ntBASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATAD3AQ9NVI7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
ATAD3AQ9NVI7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATAD3AQ9NVI7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATAD3AQ9NVI7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.59■□□□□ 0.73
ATAD3AQ9NVI7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
ATAD3AQ9NVI7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATAD3AQ9NVI7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.59■□□□□ 0.73
ATAD3AQ9NVI7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.59■□□□□ 0.73
ATAD3AQ9NVI7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms