Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
TRMT13Q9NUP7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
TRMT13Q9NUP7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.7■■□□□ 1.23
TRMT13Q9NUP7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.7■■□□□ 1.23
TRMT13Q9NUP7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 FAM210CP-201ENST00000445714 574 ntBASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 AC006557.6-201ENST00000623071 864 ntBASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 AC087633.2-202ENST00000565166 1439 ntBASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRMT13Q9NUP7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 BX088651.1-201ENST00000540551 451 ntBASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRMT13Q9NUP7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 MIR1224-201ENST00000408193 85 ntBASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 AC120498.8-201ENST00000614275 531 ntBASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.68■■□□□ 1.22
TRMT13Q9NUP7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRMT13Q9NUP7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRMT13Q9NUP7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRMT13Q9NUP7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.67■■□□□ 1.22
TRMT13Q9NUP7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.67■■□□□ 1.22
TRMT13Q9NUP7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRMT13Q9NUP7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRMT13Q9NUP7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
TRMT13Q9NUP7 AC239809.2-201ENST00000415381 517 ntBASIC22.67■■□□□ 1.22
TRMT13Q9NUP7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.67■■□□□ 1.22
TRMT13Q9NUP7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRMT13Q9NUP7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
TRMT13Q9NUP7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRMT13Q9NUP7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRMT13Q9NUP7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.66■■□□□ 1.22
TRMT13Q9NUP7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.66■■□□□ 1.22
TRMT13Q9NUP7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRMT13Q9NUP7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRMT13Q9NUP7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRMT13Q9NUP7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRMT13Q9NUP7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRMT13Q9NUP7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.66■■□□□ 1.22
TRMT13Q9NUP7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRMT13Q9NUP7 AC133681.1-201ENST00000465482 601 ntBASIC22.66■■□□□ 1.22
TRMT13Q9NUP7 LINC01023-201ENST00000606054 436 ntBASIC22.66■■□□□ 1.22
TRMT13Q9NUP7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.66■■□□□ 1.22
TRMT13Q9NUP7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.66■■□□□ 1.22
TRMT13Q9NUP7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
TRMT13Q9NUP7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRMT13Q9NUP7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TRMT13Q9NUP7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.65■■□□□ 1.22
TRMT13Q9NUP7 AC005829.2-201ENST00000571422 1056 ntBASIC22.65■■□□□ 1.22
TRMT13Q9NUP7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms