Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
BLOC1S4Q9NUP1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.94■■□□□ 1.26
BLOC1S4Q9NUP1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.94■■□□□ 1.26
BLOC1S4Q9NUP1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
BLOC1S4Q9NUP1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
BLOC1S4Q9NUP1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.94■■□□□ 1.26
BLOC1S4Q9NUP1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
BLOC1S4Q9NUP1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.94■■□□□ 1.26
BLOC1S4Q9NUP1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
BLOC1S4Q9NUP1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 CDV3P1-201ENST00000471403 739 ntBASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 AL162412.1-201ENST00000567129 965 ntBASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 FAM21FP-204ENST00000608637 956 ntBASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
BLOC1S4Q9NUP1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 AP005212.1-201ENST00000581547 1997 ntBASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 AL137784.2-201ENST00000607332 1000 ntBASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 MIR2861-201ENST00000636310 90 ntBASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
BLOC1S4Q9NUP1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 AC080038.1-201ENST00000611274 1154 ntBASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
BLOC1S4Q9NUP1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 AC092667.1-201ENST00000434301 2586 ntBASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 CDCA4P2-201ENST00000441182 718 ntBASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 RAP2CP1-201ENST00000605103 478 ntBASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 AC231657.2-201ENST00000624556 255 ntBASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 AC073111.5-205ENST00000641717 521 ntBASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 LINC01006-201ENST00000333319 2292 ntBASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
BLOC1S4Q9NUP1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
BLOC1S4Q9NUP1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
BLOC1S4Q9NUP1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
BLOC1S4Q9NUP1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.89■■□□□ 1.25
BLOC1S4Q9NUP1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
BLOC1S4Q9NUP1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.89■■□□□ 1.25
BLOC1S4Q9NUP1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.89■■□□□ 1.25
BLOC1S4Q9NUP1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
BLOC1S4Q9NUP1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.89■■□□□ 1.25
BLOC1S4Q9NUP1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.89■■□□□ 1.25
BLOC1S4Q9NUP1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.89■■□□□ 1.25
BLOC1S4Q9NUP1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
BLOC1S4Q9NUP1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms