Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HPS4Q9NQG7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HPS4Q9NQG7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.28■■□□□ 1
HPS4Q9NQG7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.28■■□□□ 1
HPS4Q9NQG7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.28■■□□□ 1
HPS4Q9NQG7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HPS4Q9NQG7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.28■■□□□ 1
HPS4Q9NQG7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.28■■□□□ 1
HPS4Q9NQG7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
HPS4Q9NQG7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
HPS4Q9NQG7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HPS4Q9NQG7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HPS4Q9NQG7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HPS4Q9NQG7 CYP21A1P-202ENST00000354927 1481 ntBASIC21.27■■□□□ 1
HPS4Q9NQG7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.27■■□□□ 1
HPS4Q9NQG7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HPS4Q9NQG7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HPS4Q9NQG7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HPS4Q9NQG7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.27■■□□□ 1
HPS4Q9NQG7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.27■■□□□ 1
HPS4Q9NQG7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.27■■□□□ 1
HPS4Q9NQG7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HPS4Q9NQG7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.27■■□□□ 1
HPS4Q9NQG7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.27■■□□□ 1
HPS4Q9NQG7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
HPS4Q9NQG7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.27■■□□□ 1
HPS4Q9NQG7 PNMA6B-201ENST00000538162 1200 ntBASIC21.27■■□□□ 1
HPS4Q9NQG7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
HPS4Q9NQG7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HPS4Q9NQG7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HPS4Q9NQG7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.27■■□□□ 1
HPS4Q9NQG7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HPS4Q9NQG7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HPS4Q9NQG7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 AL596275.1-201ENST00000423464 877 ntBASIC21.26■□□□□ 0.99
HPS4Q9NQG7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 UNC93B4-201ENST00000505679 747 ntBASIC21.26■□□□□ 0.99
HPS4Q9NQG7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HPS4Q9NQG7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HPS4Q9NQG7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 AC092368.3-202ENST00000574180 1591 ntBASIC21.24■□□□□ 0.99
HPS4Q9NQG7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 RPS2P4-201ENST00000476944 856 ntBASIC21.24■□□□□ 0.99
HPS4Q9NQG7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 AL359736.2-201ENST00000621992 437 ntBASIC21.24■□□□□ 0.99
HPS4Q9NQG7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms