Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 AC092720.2-201ENST00000602388 1665 ntBASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 AL121603.2-201ENST00000557373 2117 ntBASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 SLC25A24-204ENST00000569674 2357 ntBASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POPDC3Q9HBV1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 AC007322.3-201ENST00000426526 701 ntBASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POPDC3Q9HBV1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 KRT18P61-201ENST00000585825 1298 ntBASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.21■□□□□ 0.83
POPDC3Q9HBV1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
POPDC3Q9HBV1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
POPDC3Q9HBV1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POPDC3Q9HBV1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 AL512408.1-201ENST00000569378 2000 ntBASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
POPDC3Q9HBV1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms