Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LRTM1Q9HBL6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 DUX4L2-201ENST00000561772 1275 ntBASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 AC104187.1-201ENST00000607510 612 ntBASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 DUX4L6-201ENST00000626483 1275 ntBASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 DUX4L1-201ENST00000627662 1275 ntBASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 DUX4L8-201ENST00000629013 1275 ntBASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 DUX4L3-201ENST00000630187 1275 ntBASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 DUX4L7-201ENST00000630678 1275 ntBASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 DUX4L5-201ENST00000630834 1275 ntBASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.74■□□□□ 0.75
LRTM1Q9HBL6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.73■□□□□ 0.75
LRTM1Q9HBL6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 AC123595.1-201ENST00000440769 1046 ntBASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 AP001160.3-201ENST00000601484 763 ntBASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 AL391422.3-201ENST00000603791 2761 ntBASIC19.72■□□□□ 0.75
LRTM1Q9HBL6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 AL512408.1-201ENST00000569378 2000 ntBASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 SLC7A5P2-201ENST00000553010 536 ntBASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms