Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
NDST4Q9H3R1 AL391422.3-201ENST00000603791 2761 ntBASIC22.41■■□□□ 1.18
NDST4Q9H3R1 AL162377.1-201ENST00000618844 1793 ntBASIC22.41■■□□□ 1.18
NDST4Q9H3R1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NDST4Q9H3R1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.41■■□□□ 1.18
NDST4Q9H3R1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NDST4Q9H3R1 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.41■■□□□ 1.18
NDST4Q9H3R1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.41■■□□□ 1.18
NDST4Q9H3R1 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.41■■□□□ 1.18
NDST4Q9H3R1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.41■■□□□ 1.18
NDST4Q9H3R1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NDST4Q9H3R1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NDST4Q9H3R1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.41■■□□□ 1.18
NDST4Q9H3R1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NDST4Q9H3R1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NDST4Q9H3R1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.4■■□□□ 1.18
NDST4Q9H3R1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
NDST4Q9H3R1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NDST4Q9H3R1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NDST4Q9H3R1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
NDST4Q9H3R1 KRT18P14-201ENST00000534205 1250 ntBASIC22.4■■□□□ 1.18
NDST4Q9H3R1 KRT18P20-201ENST00000548986 1279 ntBASIC22.4■■□□□ 1.18
NDST4Q9H3R1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NDST4Q9H3R1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
NDST4Q9H3R1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NDST4Q9H3R1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NDST4Q9H3R1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.4■■□□□ 1.18
NDST4Q9H3R1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
NDST4Q9H3R1 AC004854.2-201ENST00000608450 1441 ntBASIC22.4■■□□□ 1.18
NDST4Q9H3R1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.39■■□□□ 1.18
NDST4Q9H3R1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.39■■□□□ 1.18
NDST4Q9H3R1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
NDST4Q9H3R1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
NDST4Q9H3R1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 AC116050.2-201ENST00000612102 1779 ntBASIC22.39■■□□□ 1.17
NDST4Q9H3R1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
NDST4Q9H3R1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 ZNRF2P3-201ENST00000424200 374 ntBASIC22.38■■□□□ 1.17
NDST4Q9H3R1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.38■■□□□ 1.17
NDST4Q9H3R1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NDST4Q9H3R1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NDST4Q9H3R1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NDST4Q9H3R1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NDST4Q9H3R1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NDST4Q9H3R1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NDST4Q9H3R1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms