Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 UBE2DNL-204ENST00000602536 740 ntBASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 MYCNOS-205ENST00000641950 531 ntBASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM4CQ9H3R0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 NCF1B-203ENST00000435988 1254 ntBASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 EEF1DP3-203ENST00000566025 782 ntBASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 AC053503.5-201ENST00000601508 636 ntBASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KDM4CQ9H3R0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 DUX4L16-201ENST00000555130 1264 ntBASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
KDM4CQ9H3R0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
KDM4CQ9H3R0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KDM4CQ9H3R0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
KDM4CQ9H3R0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KDM4CQ9H3R0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KDM4CQ9H3R0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KDM4CQ9H3R0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
KDM4CQ9H3R0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.33■■□□□ 1.01
KDM4CQ9H3R0 SLC7A5P1-201ENST00000568957 537 ntBASIC21.33■■□□□ 1.01
KDM4CQ9H3R0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KDM4CQ9H3R0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
KDM4CQ9H3R0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
KDM4CQ9H3R0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.32■■□□□ 1
KDM4CQ9H3R0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
KDM4CQ9H3R0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KDM4CQ9H3R0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
KDM4CQ9H3R0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KDM4CQ9H3R0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
KDM4CQ9H3R0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
KDM4CQ9H3R0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KDM4CQ9H3R0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.32■■□□□ 1
KDM4CQ9H3R0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.32■■□□□ 1
KDM4CQ9H3R0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.32■■□□□ 1
KDM4CQ9H3R0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
KDM4CQ9H3R0 AC104771.1-201ENST00000603335 964 ntBASIC21.32■■□□□ 1
KDM4CQ9H3R0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.32■■□□□ 1
KDM4CQ9H3R0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
KDM4CQ9H3R0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KDM4CQ9H3R0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
KDM4CQ9H3R0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.32■■□□□ 1
KDM4CQ9H3R0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms