Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCSER1Q9C0I3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 AL591742.1-201ENST00000604433 565 ntBASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 AC013268.1-206ENST00000638368 961 ntBASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 AC112229.1-201ENST00000639295 961 ntBASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCSER1Q9C0I3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 DUX4L16-201ENST00000555130 1264 ntBASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 AL162412.1-201ENST00000567129 965 ntBASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCSER1Q9C0I3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 AC022517.1-201ENST00000592429 346 ntBASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 FAM21FP-204ENST00000608637 956 ntBASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 AC020907.5-201ENST00000624372 1936 ntBASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCSER1Q9C0I3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCSER1Q9C0I3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCSER1Q9C0I3 CNN2P6-201ENST00000439038 900 ntBASIC23.03■■□□□ 1.28
CCSER1Q9C0I3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCSER1Q9C0I3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.03■■□□□ 1.28
CCSER1Q9C0I3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.03■■□□□ 1.28
CCSER1Q9C0I3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.03■■□□□ 1.28
CCSER1Q9C0I3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCSER1Q9C0I3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.03■■□□□ 1.28
CCSER1Q9C0I3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCSER1Q9C0I3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCSER1Q9C0I3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCSER1Q9C0I3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCSER1Q9C0I3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.03■■□□□ 1.28
CCSER1Q9C0I3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 AC011767.1-201ENST00000617410 1153 ntBASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 AC092667.1-201ENST00000434301 2586 ntBASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCSER1Q9C0I3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CCSER1Q9C0I3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCSER1Q9C0I3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCSER1Q9C0I3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CCSER1Q9C0I3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.01■■□□□ 1.27
CCSER1Q9C0I3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCSER1Q9C0I3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCSER1Q9C0I3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.01■■□□□ 1.27
CCSER1Q9C0I3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCSER1Q9C0I3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CCSER1Q9C0I3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCSER1Q9C0I3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms