Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 AC116050.2-201ENST00000612102 1779 ntBASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSBP3Q9BWW4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.14■□□□□ 0.33
SSBP3Q9BWW4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.14■□□□□ 0.33
SSBP3Q9BWW4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSBP3Q9BWW4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSBP3Q9BWW4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSBP3Q9BWW4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSBP3Q9BWW4 AC073210.2-201ENST00000430369 194 ntBASIC17.14■□□□□ 0.33
SSBP3Q9BWW4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.14■□□□□ 0.33
SSBP3Q9BWW4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.14■□□□□ 0.33
SSBP3Q9BWW4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.14■□□□□ 0.33
SSBP3Q9BWW4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSBP3Q9BWW4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.14■□□□□ 0.33
SSBP3Q9BWW4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.14■□□□□ 0.33
SSBP3Q9BWW4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSBP3Q9BWW4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 AC092118.2-201ENST00000613495 667 ntBASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 AC100791.3-201ENST00000617619 330 ntBASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSBP3Q9BWW4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 Z98882.1-201ENST00000622160 2253 ntBASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSBP3Q9BWW4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 LSM12P1-201ENST00000411836 588 ntBASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 AC098934.4-201ENST00000564127 592 ntBASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.11■□□□□ 0.33
SSBP3Q9BWW4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms