Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 RARRES2P4-201ENST00000514074 484 ntBASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 AC133552.2-202ENST00000575694 574 ntBASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCM2Q9BSQ5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 NCF1B-203ENST00000435988 1254 ntBASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 AL121832.2-201ENST00000610979 668 ntBASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 AL050303.2-201ENST00000619798 666 ntBASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCM2Q9BSQ5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 AC006128.1-201ENST00000624704 1661 ntBASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCM2Q9BSQ5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 AL512625.2-201ENST00000417533 625 ntBASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 AF201337.1-201ENST00000520239 748 ntBASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.21■□□□□ 0.83
CCM2Q9BSQ5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCM2Q9BSQ5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
CCM2Q9BSQ5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCM2Q9BSQ5 GPX1P1-201ENST00000388829 606 ntBASIC20.2■□□□□ 0.82
CCM2Q9BSQ5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.2■□□□□ 0.82
CCM2Q9BSQ5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.2■□□□□ 0.82
CCM2Q9BSQ5 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.2■□□□□ 0.82
CCM2Q9BSQ5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms