Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.02■□□□□ 0.8
PKP4Q99569 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP4Q99569 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP4Q99569 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.02■□□□□ 0.8
PKP4Q99569 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.02■□□□□ 0.8
PKP4Q99569 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PKP4Q99569 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.02■□□□□ 0.8
PKP4Q99569 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.02■□□□□ 0.8
PKP4Q99569 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP4Q99569 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.02■□□□□ 0.8
PKP4Q99569 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.02■□□□□ 0.79
PKP4Q99569 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PKP4Q99569 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PKP4Q99569 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
PKP4Q99569 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP4Q99569 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP4Q99569 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP4Q99569 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PKP4Q99569 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.01■□□□□ 0.79
PKP4Q99569 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP4Q99569 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP4Q99569 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP4Q99569 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PKP4Q99569 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PKP4Q99569 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP4Q99569 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PKP4Q99569 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PKP4Q99569 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PKP4Q99569 AC007322.1-201ENST00000426983 750 ntBASIC20.01■□□□□ 0.79
PKP4Q99569 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.01■□□□□ 0.79
PKP4Q99569 AC016405.3-201ENST00000607710 860 ntBASIC20.01■□□□□ 0.79
PKP4Q99569 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.01■□□□□ 0.79
PKP4Q99569 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.01■□□□□ 0.79
PKP4Q99569 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PKP4Q99569 AC231657.2-201ENST00000624556 255 ntBASIC20.01■□□□□ 0.79
PKP4Q99569 AC073111.5-205ENST00000641717 521 ntBASIC20.01■□□□□ 0.79
PKP4Q99569 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PKP4Q99569 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP4Q99569 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP4Q99569 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
PKP4Q99569 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP4Q99569 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.01■□□□□ 0.79
PKP4Q99569 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.01■□□□□ 0.79
PKP4Q99569 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PKP4Q99569 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP4Q99569 AC068338.2-201ENST00000563278 1430 ntBASIC20.01■□□□□ 0.79
PKP4Q99569 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PKP4Q99569 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20■□□□□ 0.79
PKP4Q99569 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20■□□□□ 0.79
PKP4Q99569 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PKP4Q99569 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PKP4Q99569 SAPCD2P1-201ENST00000395413 1184 ntBASIC20■□□□□ 0.79
PKP4Q99569 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20■□□□□ 0.79
PKP4Q99569 CDCA4P2-201ENST00000441182 718 ntBASIC20■□□□□ 0.79
PKP4Q99569 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20■□□□□ 0.79
PKP4Q99569 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20■□□□□ 0.79
PKP4Q99569 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PKP4Q99569 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20■□□□□ 0.79
PKP4Q99569 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PKP4Q99569 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PKP4Q99569 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PKP4Q99569 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.99■□□□□ 0.79
PKP4Q99569 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PKP4Q99569 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PKP4Q99569 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.99■□□□□ 0.79
PKP4Q99569 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
PKP4Q99569 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
PKP4Q99569 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PKP4Q99569 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PKP4Q99569 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.99■□□□□ 0.79
PKP4Q99569 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PKP4Q99569 AC027702.1-201ENST00000563810 1770 ntBASIC19.99■□□□□ 0.79
PKP4Q99569 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
PKP4Q99569 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PKP4Q99569 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PKP4Q99569 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PKP4Q99569 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.99■□□□□ 0.79
PKP4Q99569 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.99■□□□□ 0.79
PKP4Q99569 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.99■□□□□ 0.79
PKP4Q99569 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PKP4Q99569 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.99■□□□□ 0.79
PKP4Q99569 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PKP4Q99569 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PKP4Q99569 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PKP4Q99569 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.99■□□□□ 0.79
PKP4Q99569 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
PKP4Q99569 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PKP4Q99569 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PKP4Q99569 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.98■□□□□ 0.79
PKP4Q99569 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PKP4Q99569 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PKP4Q99569 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PKP4Q99569 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PKP4Q99569 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.98■□□□□ 0.79
PKP4Q99569 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.98■□□□□ 0.79
PKP4Q99569 AL162412.1-201ENST00000567129 965 ntBASIC19.98■□□□□ 0.79
PKP4Q99569 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.98■□□□□ 0.79
PKP4Q99569 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PKP4Q99569 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PKP4Q99569 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms