Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
LINC00479Q96M42 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00479Q96M42 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00479Q96M42 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00479Q96M42 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00479Q96M42 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00479Q96M42 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00479Q96M42 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00479Q96M42 AP005435.1-201ENST00000529293 1178 ntBASIC15.68■□□□□ 0.1
LINC00479Q96M42 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00479Q96M42 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.68■□□□□ 0.1
LINC00479Q96M42 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00479Q96M42 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LINC00479Q96M42 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00479Q96M42 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LINC00479Q96M42 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00479Q96M42 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00479Q96M42 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00479Q96M42 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00479Q96M42 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.67■□□□□ 0.1
LINC00479Q96M42 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00479Q96M42 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00479Q96M42 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00479Q96M42 AC018445.3-201ENST00000624177 1945 ntBASIC15.67■□□□□ 0.1
LINC00479Q96M42 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00479Q96M42 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00479Q96M42 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00479Q96M42 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00479Q96M42 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00479Q96M42 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00479Q96M42 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.67■□□□□ 0.1
LINC00479Q96M42 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.67■□□□□ 0.1
LINC00479Q96M42 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LINC00479Q96M42 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00479Q96M42 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00479Q96M42 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00479Q96M42 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00479Q96M42 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00479Q96M42 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LINC00479Q96M42 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LINC00479Q96M42 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00479Q96M42 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
LINC00479Q96M42 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00479Q96M42 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00479Q96M42 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00479Q96M42 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00479Q96M42 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00479Q96M42 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00479Q96M42 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00479Q96M42 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00479Q96M42 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.66■□□□□ 0.1
LINC00479Q96M42 KRT16P3-201ENST00000439127 1283 ntBASIC15.66■□□□□ 0.1
LINC00479Q96M42 SRD5A1P1-201ENST00000442297 786 ntBASIC15.66■□□□□ 0.1
LINC00479Q96M42 SLC47A1P1-202ENST00000449666 945 ntBASIC15.66■□□□□ 0.1
LINC00479Q96M42 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 AL356740.2-201ENST00000601559 647 ntBASIC15.66■□□□□ 0.1
LINC00479Q96M42 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00479Q96M42 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00479Q96M42 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 TCF3P1-201ENST00000423021 1937 ntBASIC15.66■□□□□ 0.1
LINC00479Q96M42 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00479Q96M42 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00479Q96M42 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC00479Q96M42 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00479Q96M42 AL158211.5-201ENST00000623583 2518 ntBASIC15.65■□□□□ 0.1
LINC00479Q96M42 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00479Q96M42 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00479Q96M42 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00479Q96M42 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00479Q96M42 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00479Q96M42 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC00479Q96M42 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00479Q96M42 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00479Q96M42 RARRES2P1-201ENST00000474487 481 ntBASIC15.65■□□□□ 0.1
LINC00479Q96M42 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00479Q96M42 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00479Q96M42 AC092171.4-201ENST00000609130 632 ntBASIC15.65■□□□□ 0.1
LINC00479Q96M42 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00479Q96M42 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC00479Q96M42 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00479Q96M42 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00479Q96M42 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC00479Q96M42 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00479Q96M42 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00479Q96M42 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00479Q96M42 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms