Protein–RNA interactions for Protein: Q96JC9

EAF1, ELL-associated factor 1, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EAF1Q96JC9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
EAF1Q96JC9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EAF1Q96JC9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.72■□□□□ 0.27
EAF1Q96JC9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.72■□□□□ 0.27
EAF1Q96JC9 AC006015.1-201ENST00000429970 570 ntBASIC16.72■□□□□ 0.27
EAF1Q96JC9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EAF1Q96JC9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.72■□□□□ 0.27
EAF1Q96JC9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
EAF1Q96JC9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.72■□□□□ 0.27
EAF1Q96JC9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.72■□□□□ 0.27
EAF1Q96JC9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EAF1Q96JC9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
EAF1Q96JC9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EAF1Q96JC9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EAF1Q96JC9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EAF1Q96JC9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.71■□□□□ 0.27
EAF1Q96JC9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EAF1Q96JC9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EAF1Q96JC9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EAF1Q96JC9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EAF1Q96JC9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
EAF1Q96JC9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EAF1Q96JC9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EAF1Q96JC9 AF106564.1-201ENST00000607058 2553 ntBASIC16.71■□□□□ 0.27
EAF1Q96JC9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.71■□□□□ 0.27
EAF1Q96JC9 AC245052.3-201ENST00000450182 901 ntBASIC16.71■□□□□ 0.27
EAF1Q96JC9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
EAF1Q96JC9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.71■□□□□ 0.27
EAF1Q96JC9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.71■□□□□ 0.27
EAF1Q96JC9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.71■□□□□ 0.27
EAF1Q96JC9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EAF1Q96JC9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.71■□□□□ 0.27
EAF1Q96JC9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.71■□□□□ 0.27
EAF1Q96JC9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
EAF1Q96JC9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
EAF1Q96JC9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
EAF1Q96JC9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.71■□□□□ 0.27
EAF1Q96JC9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
EAF1Q96JC9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
EAF1Q96JC9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EAF1Q96JC9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EAF1Q96JC9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
EAF1Q96JC9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.7■□□□□ 0.26
EAF1Q96JC9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.7■□□□□ 0.26
EAF1Q96JC9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
EAF1Q96JC9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
EAF1Q96JC9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EAF1Q96JC9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
EAF1Q96JC9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EAF1Q96JC9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
EAF1Q96JC9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EAF1Q96JC9 AL049796.1-201ENST00000565336 1766 ntBASIC16.7■□□□□ 0.26
EAF1Q96JC9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EAF1Q96JC9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
EAF1Q96JC9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EAF1Q96JC9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
EAF1Q96JC9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.7■□□□□ 0.26
EAF1Q96JC9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.7■□□□□ 0.26
EAF1Q96JC9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.7■□□□□ 0.26
EAF1Q96JC9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.7■□□□□ 0.26
EAF1Q96JC9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
EAF1Q96JC9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
EAF1Q96JC9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EAF1Q96JC9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EAF1Q96JC9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.7■□□□□ 0.26
EAF1Q96JC9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EAF1Q96JC9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EAF1Q96JC9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.7■□□□□ 0.26
EAF1Q96JC9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EAF1Q96JC9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EAF1Q96JC9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EAF1Q96JC9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
EAF1Q96JC9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EAF1Q96JC9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.69■□□□□ 0.26
EAF1Q96JC9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.69■□□□□ 0.26
EAF1Q96JC9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
EAF1Q96JC9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EAF1Q96JC9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.69■□□□□ 0.26
EAF1Q96JC9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
EAF1Q96JC9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.69■□□□□ 0.26
EAF1Q96JC9 IKBKGP1-201ENST00000612193 1073 ntBASIC16.69■□□□□ 0.26
EAF1Q96JC9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.69■□□□□ 0.26
EAF1Q96JC9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
EAF1Q96JC9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EAF1Q96JC9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
EAF1Q96JC9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EAF1Q96JC9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EAF1Q96JC9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.69■□□□□ 0.26
EAF1Q96JC9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
EAF1Q96JC9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
EAF1Q96JC9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EAF1Q96JC9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EAF1Q96JC9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.69■□□□□ 0.26
EAF1Q96JC9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
EAF1Q96JC9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EAF1Q96JC9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EAF1Q96JC9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EAF1Q96JC9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
EAF1Q96JC9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
EAF1Q96JC9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms