Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 CYP2T1P-201ENST00000432607 1285 ntBASIC17.32■□□□□ 0.36
NEIL1Q96FI4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 AL162412.1-201ENST00000567129 965 ntBASIC17.32■□□□□ 0.36
NEIL1Q96FI4 AC133552.2-202ENST00000575694 574 ntBASIC17.32■□□□□ 0.36
NEIL1Q96FI4 AL109923.1-201ENST00000618799 583 ntBASIC17.32■□□□□ 0.36
NEIL1Q96FI4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 AC244015.2-201ENST00000616358 1861 ntBASIC17.32■□□□□ 0.36
NEIL1Q96FI4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 AC083906.2-201ENST00000511578 360 ntBASIC17.31■□□□□ 0.36
NEIL1Q96FI4 AF201337.1-201ENST00000520239 748 ntBASIC17.31■□□□□ 0.36
NEIL1Q96FI4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEIL1Q96FI4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 CDV3P1-201ENST00000471403 739 ntBASIC17.3■□□□□ 0.36
NEIL1Q96FI4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 AC104771.1-201ENST00000603335 964 ntBASIC17.3■□□□□ 0.36
NEIL1Q96FI4 OR10C1-204ENST00000622521 1039 ntBASIC17.3■□□□□ 0.36
NEIL1Q96FI4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEIL1Q96FI4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 SLC29A4P1-201ENST00000398760 971 ntBASIC17.29■□□□□ 0.36
NEIL1Q96FI4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 AC105036.2-201ENST00000569468 176 ntBASIC17.29■□□□□ 0.36
NEIL1Q96FI4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEIL1Q96FI4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.28■□□□□ 0.36
NEIL1Q96FI4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.28■□□□□ 0.36
NEIL1Q96FI4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEIL1Q96FI4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NEIL1Q96FI4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEIL1Q96FI4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.28■□□□□ 0.36
NEIL1Q96FI4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.28■□□□□ 0.36
NEIL1Q96FI4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEIL1Q96FI4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NEIL1Q96FI4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms