Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.58■□□□□ 0.56
SNRNP40Q96DI7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.58■□□□□ 0.56
SNRNP40Q96DI7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNRNP40Q96DI7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.58■□□□□ 0.56
SNRNP40Q96DI7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNRNP40Q96DI7 AC133681.1-201ENST00000465482 601 ntBASIC18.58■□□□□ 0.56
SNRNP40Q96DI7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNRNP40Q96DI7 AP001412.1-201ENST00000608405 714 ntBASIC18.58■□□□□ 0.56
SNRNP40Q96DI7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.58■□□□□ 0.56
SNRNP40Q96DI7 AL049637.2-201ENST00000641778 930 ntBASIC18.58■□□□□ 0.56
SNRNP40Q96DI7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNRNP40Q96DI7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNRNP40Q96DI7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNRNP40Q96DI7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 AC239809.2-201ENST00000415381 517 ntBASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 AC120498.8-201ENST00000614275 531 ntBASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.57■□□□□ 0.56
SNRNP40Q96DI7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP40Q96DI7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 AC110285.5-201ENST00000611501 352 ntBASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 AC133561.5-201ENST00000635547 218 ntBASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 C9orf163-202ENST00000624034 2573 ntBASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 AL135905.2-201ENST00000584934 1404 ntBASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP40Q96DI7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 FAM99A-202ENST00000538190 1989 ntBASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms