Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX1Q92499 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX1Q92499 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
DDX1Q92499 MYCNOS-205ENST00000641950 531 ntBASIC21.94■■□□□ 1.1
DDX1Q92499 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX1Q92499 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX1Q92499 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX1Q92499 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.94■■□□□ 1.1
DDX1Q92499 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX1Q92499 AC116050.2-201ENST00000612102 1779 ntBASIC21.94■■□□□ 1.1
DDX1Q92499 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
DDX1Q92499 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX1Q92499 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX1Q92499 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX1Q92499 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.93■■□□□ 1.1
DDX1Q92499 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX1Q92499 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX1Q92499 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX1Q92499 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX1Q92499 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX1Q92499 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX1Q92499 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.93■■□□□ 1.1
DDX1Q92499 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.93■■□□□ 1.1
DDX1Q92499 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.93■■□□□ 1.1
DDX1Q92499 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.93■■□□□ 1.1
DDX1Q92499 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX1Q92499 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
DDX1Q92499 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX1Q92499 FP700111.2-201ENST00000619190 1892 ntBASIC21.93■■□□□ 1.1
DDX1Q92499 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX1Q92499 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.93■■□□□ 1.1
DDX1Q92499 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX1Q92499 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX1Q92499 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX1Q92499 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX1Q92499 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.92■■□□□ 1.1
DDX1Q92499 GABARAPL3-202ENST00000624044 1851 ntBASIC21.92■■□□□ 1.1
DDX1Q92499 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX1Q92499 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
DDX1Q92499 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.92■■□□□ 1.1
DDX1Q92499 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX1Q92499 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX1Q92499 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.92■■□□□ 1.1
DDX1Q92499 CROCCP5-201ENST00000436658 830 ntBASIC21.92■■□□□ 1.1
DDX1Q92499 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.92■■□□□ 1.1
DDX1Q92499 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.92■■□□□ 1.1
DDX1Q92499 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX1Q92499 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
DDX1Q92499 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX1Q92499 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX1Q92499 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.92■■□□□ 1.1
DDX1Q92499 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX1Q92499 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
DDX1Q92499 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
DDX1Q92499 AL121603.2-201ENST00000557373 2117 ntBASIC21.91■■□□□ 1.1
DDX1Q92499 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX1Q92499 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX1Q92499 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
DDX1Q92499 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX1Q92499 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.91■■□□□ 1.1
DDX1Q92499 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.91■■□□□ 1.1
DDX1Q92499 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.91■■□□□ 1.1
DDX1Q92499 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.91■■□□□ 1.1
DDX1Q92499 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
DDX1Q92499 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX1Q92499 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.91■■□□□ 1.1
DDX1Q92499 AC073130.3-201ENST00000624389 2278 ntBASIC21.91■■□□□ 1.1
DDX1Q92499 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX1Q92499 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX1Q92499 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX1Q92499 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
DDX1Q92499 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX1Q92499 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
DDX1Q92499 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX1Q92499 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
DDX1Q92499 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX1Q92499 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX1Q92499 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
DDX1Q92499 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX1Q92499 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
DDX1Q92499 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX1Q92499 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.9■■□□□ 1.1
DDX1Q92499 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.9■■□□□ 1.1
DDX1Q92499 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.9■■□□□ 1.1
DDX1Q92499 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
DDX1Q92499 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.9■■□□□ 1.1
DDX1Q92499 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
DDX1Q92499 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
DDX1Q92499 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX1Q92499 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.9■■□□□ 1.1
DDX1Q92499 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX1Q92499 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX1Q92499 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.9■■□□□ 1.1
DDX1Q92499 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
DDX1Q92499 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX1Q92499 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX1Q92499 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
DDX1Q92499 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
DDX1Q92499 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
DDX1Q92499 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms