Protein–RNA interactions for Protein: Q8WW27

APOBEC4, Putative C->U-editing enzyme APOBEC-4, humanhuman

Known RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC4Q8WW27 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.65■□□□□ 0.74
APOBEC4Q8WW27 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.65■□□□□ 0.74
APOBEC4Q8WW27 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC4Q8WW27 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.65■□□□□ 0.74
APOBEC4Q8WW27 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.65■□□□□ 0.74
APOBEC4Q8WW27 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC4Q8WW27 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC4Q8WW27 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
APOBEC4Q8WW27 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
APOBEC4Q8WW27 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
APOBEC4Q8WW27 POU5F1P4-201ENST00000413175 1085 ntBASIC19.64■□□□□ 0.73
APOBEC4Q8WW27 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.64■□□□□ 0.73
APOBEC4Q8WW27 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.64■□□□□ 0.73
APOBEC4Q8WW27 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
APOBEC4Q8WW27 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.64■□□□□ 0.73
APOBEC4Q8WW27 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.64■□□□□ 0.73
APOBEC4Q8WW27 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.64■□□□□ 0.73
APOBEC4Q8WW27 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.64■□□□□ 0.73
APOBEC4Q8WW27 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOBEC4Q8WW27 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOBEC4Q8WW27 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.64■□□□□ 0.73
APOBEC4Q8WW27 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.64■□□□□ 0.73
APOBEC4Q8WW27 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
APOBEC4Q8WW27 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOBEC4Q8WW27 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 AC098590.1-201ENST00000468126 897 ntBASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 MYC-209ENST00000641252 345 ntBASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.63■□□□□ 0.73
APOBEC4Q8WW27 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 GCSHP5-201ENST00000443090 522 ntBASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 AL162412.1-201ENST00000567129 965 ntBASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.62■□□□□ 0.73
APOBEC4Q8WW27 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOBEC4Q8WW27 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOBEC4Q8WW27 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOBEC4Q8WW27 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APOBEC4Q8WW27 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.61■□□□□ 0.73
APOBEC4Q8WW27 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.61■□□□□ 0.73
APOBEC4Q8WW27 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.61■□□□□ 0.73
APOBEC4Q8WW27 AL591742.1-201ENST00000604433 565 ntBASIC19.61■□□□□ 0.73
APOBEC4Q8WW27 AC073130.3-201ENST00000624389 2278 ntBASIC19.61■□□□□ 0.73
APOBEC4Q8WW27 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
APOBEC4Q8WW27 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOBEC4Q8WW27 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APOBEC4Q8WW27 AL157384.1-201ENST00000445995 2473 ntBASIC19.61■□□□□ 0.73
APOBEC4Q8WW27 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 AL049796.1-201ENST00000565336 1766 ntBASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 AC091874.3-201ENST00000512672 1195 ntBASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 AC006058.3-201ENST00000606217 1069 ntBASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOBEC4Q8WW27 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APOBEC4Q8WW27 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
APOBEC4Q8WW27 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APOBEC4Q8WW27 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.59■□□□□ 0.73
APOBEC4Q8WW27 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms