Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNIH3Q8TBE1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNIH3Q8TBE1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNIH3Q8TBE1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CNIH3Q8TBE1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.77■□□□□ 0.6
CNIH3Q8TBE1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNIH3Q8TBE1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNIH3Q8TBE1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNIH3Q8TBE1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CNIH3Q8TBE1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNIH3Q8TBE1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.77■□□□□ 0.6
CNIH3Q8TBE1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CNIH3Q8TBE1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNIH3Q8TBE1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 RARRES2P1-201ENST00000474487 481 ntBASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNIH3Q8TBE1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 AC004408.2-201ENST00000623613 2777 ntBASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 MIR6724-1-201ENST00000616420 92 ntBASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 MIR6724-2-201ENST00000616483 92 ntBASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 MIR6724-4-201ENST00000617390 92 ntBASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 MIR6724-3-201ENST00000622482 92 ntBASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNIH3Q8TBE1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 BX005040.4-201ENST00000637145 1518 ntBASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.74■□□□□ 0.59
CNIH3Q8TBE1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 TNXA-203ENST00000507684 2038 ntBASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms