Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 NTM-206ENST00000427481 2583 ntTSL 5 BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
SVIPQ8NHG7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SVIPQ8NHG7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.01□□□□□ -0.33
SVIPQ8NHG7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SVIPQ8NHG7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13□□□□□ -0.33
SVIPQ8NHG7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC13□□□□□ -0.33
SVIPQ8NHG7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
SVIPQ8NHG7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 AC079598.2-202ENST00000546624 1451 ntBASIC13□□□□□ -0.33
SVIPQ8NHG7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SVIPQ8NHG7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13□□□□□ -0.33
SVIPQ8NHG7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SVIPQ8NHG7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13□□□□□ -0.33
SVIPQ8NHG7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13□□□□□ -0.33
SVIPQ8NHG7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SVIPQ8NHG7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
SVIPQ8NHG7 AC099063.4-201ENST00000641099 1602 ntBASIC12.99□□□□□ -0.33
SVIPQ8NHG7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms