Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC168Q8NDH2 CYP2D8P-201ENST00000433633 1490 ntBASIC17.34■□□□□ 0.37
CCDC168Q8NDH2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC168Q8NDH2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC168Q8NDH2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC168Q8NDH2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC168Q8NDH2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC168Q8NDH2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
CCDC168Q8NDH2 AC079598.2-202ENST00000546624 1451 ntBASIC17.34■□□□□ 0.37
CCDC168Q8NDH2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC168Q8NDH2 AC010947.1-201ENST00000623454 693 ntBASIC17.34■□□□□ 0.37
CCDC168Q8NDH2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC168Q8NDH2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCDC168Q8NDH2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 FAM197Y1-201ENST00000421178 764 ntBASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 AC005829.2-201ENST00000571422 1056 ntBASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC168Q8NDH2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC168Q8NDH2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC168Q8NDH2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.33■□□□□ 0.36
CCDC168Q8NDH2 AP000525.1-201ENST00000608286 694 ntBASIC17.33■□□□□ 0.36
CCDC168Q8NDH2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC168Q8NDH2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC168Q8NDH2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC168Q8NDH2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC168Q8NDH2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC168Q8NDH2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC168Q8NDH2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC168Q8NDH2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 AL353807.1-201ENST00000427475 662 ntBASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC168Q8NDH2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC168Q8NDH2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC168Q8NDH2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC168Q8NDH2 C11orf96-202ENST00000528572 1834 ntBASIC17.31■□□□□ 0.36
CCDC168Q8NDH2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC168Q8NDH2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
CCDC168Q8NDH2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CCDC168Q8NDH2 REXO1L10P-201ENST00000615707 1290 ntBASIC17.31■□□□□ 0.36
CCDC168Q8NDH2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC168Q8NDH2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 AC026396.1-201ENST00000419388 421 ntBASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC168Q8NDH2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 AL137013.1-201ENST00000432946 1228 ntBASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms