Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RETREG2Q8NC44 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RETREG2Q8NC44 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RETREG2Q8NC44 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RETREG2Q8NC44 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.28■■□□□ 1.32
RETREG2Q8NC44 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RETREG2Q8NC44 AC091874.3-201ENST00000512672 1195 ntBASIC23.28■■□□□ 1.32
RETREG2Q8NC44 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RETREG2Q8NC44 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RETREG2Q8NC44 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.28■■□□□ 1.32
RETREG2Q8NC44 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RETREG2Q8NC44 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.28■■□□□ 1.32
RETREG2Q8NC44 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.27■■□□□ 1.32
RETREG2Q8NC44 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
RETREG2Q8NC44 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.27■■□□□ 1.32
RETREG2Q8NC44 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.27■■□□□ 1.32
RETREG2Q8NC44 AC010980.2-201ENST00000587099 1412 ntBASIC23.27■■□□□ 1.32
RETREG2Q8NC44 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RETREG2Q8NC44 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.27■■□□□ 1.32
RETREG2Q8NC44 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.27■■□□□ 1.32
RETREG2Q8NC44 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RETREG2Q8NC44 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.27■■□□□ 1.32
RETREG2Q8NC44 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RETREG2Q8NC44 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RETREG2Q8NC44 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RETREG2Q8NC44 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RETREG2Q8NC44 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RETREG2Q8NC44 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
RETREG2Q8NC44 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.26■■□□□ 1.31
RETREG2Q8NC44 RBM17P2-201ENST00000616397 1405 ntBASIC23.26■■□□□ 1.31
RETREG2Q8NC44 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RETREG2Q8NC44 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RETREG2Q8NC44 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RETREG2Q8NC44 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.26■■□□□ 1.31
RETREG2Q8NC44 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RETREG2Q8NC44 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.26■■□□□ 1.31
RETREG2Q8NC44 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RETREG2Q8NC44 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.26■■□□□ 1.31
RETREG2Q8NC44 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.26■■□□□ 1.31
RETREG2Q8NC44 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RETREG2Q8NC44 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RETREG2Q8NC44 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RETREG2Q8NC44 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RETREG2Q8NC44 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.25■■□□□ 1.31
RETREG2Q8NC44 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
RETREG2Q8NC44 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.25■■□□□ 1.31
RETREG2Q8NC44 AC098590.1-201ENST00000468126 897 ntBASIC23.25■■□□□ 1.31
RETREG2Q8NC44 AC006058.3-201ENST00000606217 1069 ntBASIC23.25■■□□□ 1.31
RETREG2Q8NC44 AC243732.1-201ENST00000612648 864 ntBASIC23.25■■□□□ 1.31
RETREG2Q8NC44 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RETREG2Q8NC44 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RETREG2Q8NC44 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RETREG2Q8NC44 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
RETREG2Q8NC44 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RETREG2Q8NC44 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RETREG2Q8NC44 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RETREG2Q8NC44 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RETREG2Q8NC44 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
RETREG2Q8NC44 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.24■■□□□ 1.31
RETREG2Q8NC44 GCSHP5-201ENST00000443090 522 ntBASIC23.24■■□□□ 1.31
RETREG2Q8NC44 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RETREG2Q8NC44 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.24■■□□□ 1.31
RETREG2Q8NC44 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.24■■□□□ 1.31
RETREG2Q8NC44 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RETREG2Q8NC44 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.24■■□□□ 1.31
RETREG2Q8NC44 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RETREG2Q8NC44 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
RETREG2Q8NC44 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.23■■□□□ 1.31
RETREG2Q8NC44 AL158047.1-201ENST00000445918 881 ntBASIC23.23■■□□□ 1.31
RETREG2Q8NC44 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 AC142381.4-202ENST00000563973 229 ntBASIC23.23■■□□□ 1.31
RETREG2Q8NC44 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.23■■□□□ 1.31
RETREG2Q8NC44 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.22■■□□□ 1.31
RETREG2Q8NC44 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RETREG2Q8NC44 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RETREG2Q8NC44 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RETREG2Q8NC44 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.22■■□□□ 1.31
RETREG2Q8NC44 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
RETREG2Q8NC44 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.22■■□□□ 1.31
RETREG2Q8NC44 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms