Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.9■■□□□ 1.1
TTC39CQ8N584 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39CQ8N584 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39CQ8N584 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39CQ8N584 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
TTC39CQ8N584 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.89■■□□□ 1.1
TTC39CQ8N584 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
TTC39CQ8N584 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TTC39CQ8N584 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39CQ8N584 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39CQ8N584 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39CQ8N584 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
TTC39CQ8N584 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39CQ8N584 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39CQ8N584 MCRIP2P1-201ENST00000394346 511 ntBASIC21.89■■□□□ 1.09
TTC39CQ8N584 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.89■■□□□ 1.09
TTC39CQ8N584 AF201337.1-201ENST00000520239 748 ntBASIC21.89■■□□□ 1.09
TTC39CQ8N584 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39CQ8N584 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
TTC39CQ8N584 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.89■■□□□ 1.09
TTC39CQ8N584 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.89■■□□□ 1.09
TTC39CQ8N584 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39CQ8N584 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39CQ8N584 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39CQ8N584 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39CQ8N584 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39CQ8N584 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39CQ8N584 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.88■■□□□ 1.09
TTC39CQ8N584 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39CQ8N584 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39CQ8N584 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.88■■□□□ 1.09
TTC39CQ8N584 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.88■■□□□ 1.09
TTC39CQ8N584 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.88■■□□□ 1.09
TTC39CQ8N584 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.88■■□□□ 1.09
TTC39CQ8N584 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.88■■□□□ 1.09
TTC39CQ8N584 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.88■■□□□ 1.09
TTC39CQ8N584 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39CQ8N584 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39CQ8N584 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39CQ8N584 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.88■■□□□ 1.09
TTC39CQ8N584 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.88■■□□□ 1.09
TTC39CQ8N584 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39CQ8N584 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39CQ8N584 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39CQ8N584 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39CQ8N584 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39CQ8N584 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39CQ8N584 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39CQ8N584 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.87■■□□□ 1.09
TTC39CQ8N584 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39CQ8N584 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39CQ8N584 AL121832.2-201ENST00000610979 668 ntBASIC21.87■■□□□ 1.09
TTC39CQ8N584 AL050303.2-201ENST00000619798 666 ntBASIC21.87■■□□□ 1.09
TTC39CQ8N584 CYP21A1P-202ENST00000354927 1481 ntBASIC21.87■■□□□ 1.09
TTC39CQ8N584 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TTC39CQ8N584 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.87■■□□□ 1.09
TTC39CQ8N584 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.87■■□□□ 1.09
TTC39CQ8N584 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TTC39CQ8N584 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39CQ8N584 AC087633.2-202ENST00000565166 1439 ntBASIC21.87■■□□□ 1.09
TTC39CQ8N584 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39CQ8N584 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39CQ8N584 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39CQ8N584 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
TTC39CQ8N584 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39CQ8N584 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39CQ8N584 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.86■■□□□ 1.09
TTC39CQ8N584 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.86■■□□□ 1.09
TTC39CQ8N584 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.86■■□□□ 1.09
TTC39CQ8N584 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
TTC39CQ8N584 AC090192.1-201ENST00000517740 490 ntBASIC21.86■■□□□ 1.09
TTC39CQ8N584 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TTC39CQ8N584 MIR2861-201ENST00000636310 90 ntBASIC21.86■■□□□ 1.09
TTC39CQ8N584 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.86■■□□□ 1.09
TTC39CQ8N584 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39CQ8N584 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39CQ8N584 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.86■■□□□ 1.09
TTC39CQ8N584 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39CQ8N584 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39CQ8N584 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39CQ8N584 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39CQ8N584 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39CQ8N584 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39CQ8N584 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39CQ8N584 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39CQ8N584 NCF1B-203ENST00000435988 1254 ntBASIC21.85■■□□□ 1.09
TTC39CQ8N584 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.85■■□□□ 1.09
TTC39CQ8N584 AC010980.2-201ENST00000587099 1412 ntBASIC21.85■■□□□ 1.09
TTC39CQ8N584 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TTC39CQ8N584 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
TTC39CQ8N584 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TTC39CQ8N584 AL137060.1-201ENST00000618151 2648 ntBASIC21.85■■□□□ 1.09
TTC39CQ8N584 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.85■■□□□ 1.09
TTC39CQ8N584 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TTC39CQ8N584 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
TTC39CQ8N584 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39CQ8N584 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39CQ8N584 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39CQ8N584 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39CQ8N584 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms