Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.47■■□□□ 1.03
SCML4Q8N228 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.47■■□□□ 1.03
SCML4Q8N228 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.47■■□□□ 1.03
SCML4Q8N228 MIR2861-201ENST00000636310 90 ntBASIC21.47■■□□□ 1.03
SCML4Q8N228 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.47■■□□□ 1.03
SCML4Q8N228 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SCML4Q8N228 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SCML4Q8N228 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCML4Q8N228 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCML4Q8N228 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.46■■□□□ 1.03
SCML4Q8N228 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.46■■□□□ 1.03
SCML4Q8N228 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCML4Q8N228 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.46■■□□□ 1.03
SCML4Q8N228 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SCML4Q8N228 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCML4Q8N228 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCML4Q8N228 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SCML4Q8N228 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SCML4Q8N228 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCML4Q8N228 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCML4Q8N228 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SCML4Q8N228 BX276092.2-201ENST00000417668 665 ntBASIC21.46■■□□□ 1.03
SCML4Q8N228 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
SCML4Q8N228 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SCML4Q8N228 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCML4Q8N228 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCML4Q8N228 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SCML4Q8N228 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.46■■□□□ 1.03
SCML4Q8N228 AC007375.3-201ENST00000600936 2314 ntBASIC21.45■■□□□ 1.02
SCML4Q8N228 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SCML4Q8N228 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCML4Q8N228 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCML4Q8N228 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCML4Q8N228 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SCML4Q8N228 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SCML4Q8N228 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.45■■□□□ 1.02
SCML4Q8N228 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCML4Q8N228 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.45■■□□□ 1.02
SCML4Q8N228 AL589743.5-201ENST00000616611 1050 ntBASIC21.45■■□□□ 1.02
SCML4Q8N228 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SCML4Q8N228 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCML4Q8N228 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCML4Q8N228 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SCML4Q8N228 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
SCML4Q8N228 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCML4Q8N228 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCML4Q8N228 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.44■■□□□ 1.02
SCML4Q8N228 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SCML4Q8N228 AC005229.4-201ENST00000610085 2198 ntBASIC21.44■■□□□ 1.02
SCML4Q8N228 AC006128.1-201ENST00000624704 1661 ntBASIC21.44■■□□□ 1.02
SCML4Q8N228 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCML4Q8N228 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCML4Q8N228 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SCML4Q8N228 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCML4Q8N228 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCML4Q8N228 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCML4Q8N228 AL355472.2-201ENST00000422958 438 ntBASIC21.44■■□□□ 1.02
SCML4Q8N228 AL138781.1-201ENST00000566567 1274 ntBASIC21.44■■□□□ 1.02
SCML4Q8N228 AC105020.6-201ENST00000621523 1217 ntBASIC21.44■■□□□ 1.02
SCML4Q8N228 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.44■■□□□ 1.02
SCML4Q8N228 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCML4Q8N228 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCML4Q8N228 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCML4Q8N228 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCML4Q8N228 KRT17P1-201ENST00000399211 1546 ntBASIC21.44■■□□□ 1.02
SCML4Q8N228 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SCML4Q8N228 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCML4Q8N228 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.43■■□□□ 1.02
SCML4Q8N228 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCML4Q8N228 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCML4Q8N228 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCML4Q8N228 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCML4Q8N228 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCML4Q8N228 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCML4Q8N228 AC069152.1-201ENST00000438030 544 ntBASIC21.43■■□□□ 1.02
SCML4Q8N228 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
SCML4Q8N228 AC133041.1-202ENST00000642053 222 ntBASIC21.43■■□□□ 1.02
SCML4Q8N228 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.43■■□□□ 1.02
SCML4Q8N228 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCML4Q8N228 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.43■■□□□ 1.02
SCML4Q8N228 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.43■■□□□ 1.02
SCML4Q8N228 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCML4Q8N228 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.43■■□□□ 1.02
SCML4Q8N228 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCML4Q8N228 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.43■■□□□ 1.02
SCML4Q8N228 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SCML4Q8N228 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SCML4Q8N228 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCML4Q8N228 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.42■■□□□ 1.02
SCML4Q8N228 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SCML4Q8N228 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.42■■□□□ 1.02
SCML4Q8N228 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SCML4Q8N228 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.42■■□□□ 1.02
SCML4Q8N228 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.42■■□□□ 1.02
SCML4Q8N228 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SCML4Q8N228 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SCML4Q8N228 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.42■■□□□ 1.02
SCML4Q8N228 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.42■■□□□ 1.02
SCML4Q8N228 AL356652.1-201ENST00000615962 565 ntBASIC21.42■■□□□ 1.02
SCML4Q8N228 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms