Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF440Q8IYI8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF440Q8IYI8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ZNF440Q8IYI8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF440Q8IYI8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 RARRES2P6-201ENST00000567333 442 ntBASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF440Q8IYI8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 AP005212.1-201ENST00000581547 1997 ntBASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 AC137761.2-201ENST00000561729 223 ntBASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 AC145350.3-201ENST00000569033 163 ntBASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 AC010536.3-201ENST00000620306 533 ntBASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF440Q8IYI8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF440Q8IYI8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF440Q8IYI8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.77■□□□□ 0.59
ZNF440Q8IYI8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 AC026271.2-201ENST00000428091 497 ntBASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 KRT18P5-201ENST00000436075 1291 ntBASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 TERF1P5-201ENST00000477545 1207 ntBASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF440Q8IYI8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms