Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 GABARAPL3-202ENST00000624044 1851 ntBASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC00346Q8IVM7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00346Q8IVM7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 AL391422.3-201ENST00000603791 2761 ntBASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.16■□□□□ 0.5
LINC00346Q8IVM7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00346Q8IVM7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms