Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 AC011767.1-201ENST00000617410 1153 ntBASIC19.25■□□□□ 0.67
CCDC71Q8IV32 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CCDC71Q8IV32 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 AC006128.1-201ENST00000624704 1661 ntBASIC19.24■□□□□ 0.67
CCDC71Q8IV32 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 CROCCP5-201ENST00000436658 830 ntBASIC19.24■□□□□ 0.67
CCDC71Q8IV32 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.24■□□□□ 0.67
CCDC71Q8IV32 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71Q8IV32 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 AC104771.1-201ENST00000603335 964 ntBASIC19.23■□□□□ 0.67
CCDC71Q8IV32 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71Q8IV32 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71Q8IV32 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC71Q8IV32 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC71Q8IV32 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC71Q8IV32 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC71Q8IV32 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC71Q8IV32 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC71Q8IV32 KRT18P11-201ENST00000435214 1283 ntBASIC19.21■□□□□ 0.67
CCDC71Q8IV32 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC71Q8IV32 AL109923.1-201ENST00000618799 583 ntBASIC19.21■□□□□ 0.67
CCDC71Q8IV32 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CCDC71Q8IV32 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCDC71Q8IV32 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms