Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RAB43Q86YS6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB43Q86YS6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB43Q86YS6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RAB43Q86YS6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB43Q86YS6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB43Q86YS6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB43Q86YS6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB43Q86YS6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RAB43Q86YS6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RAB43Q86YS6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RAB43Q86YS6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB43Q86YS6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.58■□□□□ 0.72
RAB43Q86YS6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.58■□□□□ 0.72
RAB43Q86YS6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB43Q86YS6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.58■□□□□ 0.72
RAB43Q86YS6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RAB43Q86YS6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RAB43Q86YS6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB43Q86YS6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB43Q86YS6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB43Q86YS6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB43Q86YS6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB43Q86YS6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.58■□□□□ 0.72
RAB43Q86YS6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB43Q86YS6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB43Q86YS6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB43Q86YS6 FBXW4P1-201ENST00000426721 2239 ntBASIC19.57■□□□□ 0.72
RAB43Q86YS6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB43Q86YS6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.57■□□□□ 0.72
RAB43Q86YS6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB43Q86YS6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB43Q86YS6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
RAB43Q86YS6 AC245052.3-201ENST00000450182 901 ntBASIC19.57■□□□□ 0.72
RAB43Q86YS6 RARRES2P4-201ENST00000514074 484 ntBASIC19.57■□□□□ 0.72
RAB43Q86YS6 RNA5SP413-201ENST00000516373 109 ntBASIC19.57■□□□□ 0.72
RAB43Q86YS6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.57■□□□□ 0.72
RAB43Q86YS6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
RAB43Q86YS6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB43Q86YS6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB43Q86YS6 C11orf96-202ENST00000528572 1834 ntBASIC19.57■□□□□ 0.72
RAB43Q86YS6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RAB43Q86YS6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB43Q86YS6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB43Q86YS6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB43Q86YS6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB43Q86YS6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RAB43Q86YS6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB43Q86YS6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB43Q86YS6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB43Q86YS6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB43Q86YS6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.56■□□□□ 0.72
RAB43Q86YS6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB43Q86YS6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
RAB43Q86YS6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB43Q86YS6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB43Q86YS6 MIR4651-201ENST00000582622 73 ntBASIC19.56■□□□□ 0.72
RAB43Q86YS6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB43Q86YS6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB43Q86YS6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RAB43Q86YS6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB43Q86YS6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RAB43Q86YS6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB43Q86YS6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RAB43Q86YS6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAB43Q86YS6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
RAB43Q86YS6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.55■□□□□ 0.72
RAB43Q86YS6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB43Q86YS6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB43Q86YS6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB43Q86YS6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.55■□□□□ 0.72
RAB43Q86YS6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB43Q86YS6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAB43Q86YS6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB43Q86YS6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.55■□□□□ 0.72
RAB43Q86YS6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB43Q86YS6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.55■□□□□ 0.72
RAB43Q86YS6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
RAB43Q86YS6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB43Q86YS6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB43Q86YS6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB43Q86YS6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB43Q86YS6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.54■□□□□ 0.72
RAB43Q86YS6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.54■□□□□ 0.72
RAB43Q86YS6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB43Q86YS6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB43Q86YS6 AC010980.2-201ENST00000587099 1412 ntBASIC19.54■□□□□ 0.72
RAB43Q86YS6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB43Q86YS6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB43Q86YS6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB43Q86YS6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB43Q86YS6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB43Q86YS6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB43Q86YS6 AC097658.1-201ENST00000475555 843 ntBASIC19.54■□□□□ 0.72
RAB43Q86YS6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB43Q86YS6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB43Q86YS6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB43Q86YS6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB43Q86YS6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB43Q86YS6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms