Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 AF186192.3-201ENST00000583427 947 ntBASIC26.1■■□□□ 1.77
COL23A1Q86Y22 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
COL23A1Q86Y22 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 AC092053.2-201ENST00000640557 1818 ntBASIC26.09■■□□□ 1.77
COL23A1Q86Y22 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 NME3-204ENST00000563498 920 ntTSL 2 BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 AC068473.5-201ENST00000616428 2072 ntBASIC26.09■■□□□ 1.77
COL23A1Q86Y22 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
COL23A1Q86Y22 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.08■■□□□ 1.77
COL23A1Q86Y22 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL23A1Q86Y22 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL23A1Q86Y22 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
COL23A1Q86Y22 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL23A1Q86Y22 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.08■■□□□ 1.77
COL23A1Q86Y22 WDR88-203ENST00000592765 651 ntTSL 5 BASIC26.08■■□□□ 1.77
COL23A1Q86Y22 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC26.08■■□□□ 1.77
COL23A1Q86Y22 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL23A1Q86Y22 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
COL23A1Q86Y22 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.08■■□□□ 1.77
COL23A1Q86Y22 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL23A1Q86Y22 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.08■■□□□ 1.77
COL23A1Q86Y22 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL23A1Q86Y22 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.07■■□□□ 1.76
COL23A1Q86Y22 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC26.07■■□□□ 1.76
COL23A1Q86Y22 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC26.07■■□□□ 1.76
COL23A1Q86Y22 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.07■■□□□ 1.76
COL23A1Q86Y22 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC26.07■■□□□ 1.76
COL23A1Q86Y22 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL23A1Q86Y22 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.07■■□□□ 1.76
COL23A1Q86Y22 AC116050.2-201ENST00000612102 1779 ntBASIC26.07■■□□□ 1.76
COL23A1Q86Y22 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL23A1Q86Y22 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
COL23A1Q86Y22 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 RPS15-203ENST00000586096 570 ntTSL 2 BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL23A1Q86Y22 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COL23A1Q86Y22 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL23A1Q86Y22 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COL23A1Q86Y22 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COL23A1Q86Y22 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC26.05■■□□□ 1.76
COL23A1Q86Y22 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL23A1Q86Y22 RER1-204ENST00000378518 522 ntTSL 3 BASIC26.05■■□□□ 1.76
COL23A1Q86Y22 FAM197Y1-201ENST00000421178 764 ntBASIC26.05■■□□□ 1.76
COL23A1Q86Y22 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC26.05■■□□□ 1.76
COL23A1Q86Y22 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC26.05■■□□□ 1.76
COL23A1Q86Y22 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC26.05■■□□□ 1.76
COL23A1Q86Y22 AC010542.4-201ENST00000563151 1910 ntBASIC26.05■■□□□ 1.76
COL23A1Q86Y22 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC26.05■■□□□ 1.76
COL23A1Q86Y22 HTR7P1-201ENST00000538670 1336 ntBASIC26.05■■□□□ 1.76
COL23A1Q86Y22 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL23A1Q86Y22 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
COL23A1Q86Y22 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COL23A1Q86Y22 CRAT-202ENST00000393384 973 ntTSL 2 BASIC26.04■■□□□ 1.76
COL23A1Q86Y22 KRT18P57-201ENST00000443599 1254 ntBASIC26.04■■□□□ 1.76
COL23A1Q86Y22 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC26.04■■□□□ 1.76
COL23A1Q86Y22 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms