Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CSMD3Q7Z407 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC14.44□□□□□ -0.1
CSMD3Q7Z407 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.44□□□□□ -0.1
CSMD3Q7Z407 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.44□□□□□ -0.1
CSMD3Q7Z407 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.44□□□□□ -0.1
CSMD3Q7Z407 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.44□□□□□ -0.1
CSMD3Q7Z407 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSMD3Q7Z407 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.44□□□□□ -0.1
CSMD3Q7Z407 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 AL049597.2-201ENST00000565575 961 ntBASIC14.43□□□□□ -0.1
CSMD3Q7Z407 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.43□□□□□ -0.1
CSMD3Q7Z407 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 KRT18P57-201ENST00000443599 1254 ntBASIC14.42□□□□□ -0.1
CSMD3Q7Z407 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 AC113410.3-201ENST00000623366 203 ntBASIC14.42□□□□□ -0.1
CSMD3Q7Z407 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 AC124283.5-201ENST00000624661 1809 ntBASIC14.42□□□□□ -0.1
CSMD3Q7Z407 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 TERF1P1-201ENST00000311003 1181 ntBASIC14.42□□□□□ -0.1
CSMD3Q7Z407 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.42□□□□□ -0.1
CSMD3Q7Z407 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CSMD3Q7Z407 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 CYP2D8P-201ENST00000433633 1490 ntBASIC14.41□□□□□ -0.1
CSMD3Q7Z407 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 REXO1L10P-201ENST00000615707 1290 ntBASIC14.41□□□□□ -0.1
CSMD3Q7Z407 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.41□□□□□ -0.1
CSMD3Q7Z407 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CSMD3Q7Z407 TERT-206ENST00000508104 2486 ntTSL 5 BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms