Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC26.1■■□□□ 1.77
COPS6Q7L5N1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COPS6Q7L5N1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
COPS6Q7L5N1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
COPS6Q7L5N1 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.1■■□□□ 1.77
COPS6Q7L5N1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COPS6Q7L5N1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COPS6Q7L5N1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COPS6Q7L5N1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COPS6Q7L5N1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.09■■□□□ 1.77
COPS6Q7L5N1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COPS6Q7L5N1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC26.09■■□□□ 1.77
COPS6Q7L5N1 AC092368.3-202ENST00000574180 1591 ntBASIC26.09■■□□□ 1.77
COPS6Q7L5N1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COPS6Q7L5N1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
COPS6Q7L5N1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.09■■□□□ 1.77
COPS6Q7L5N1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COPS6Q7L5N1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
COPS6Q7L5N1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
COPS6Q7L5N1 AC073648.6-201ENST00000641589 218 ntBASIC26.09■■□□□ 1.77
COPS6Q7L5N1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
COPS6Q7L5N1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC26.09■■□□□ 1.77
COPS6Q7L5N1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COPS6Q7L5N1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.08■■□□□ 1.77
COPS6Q7L5N1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
COPS6Q7L5N1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COPS6Q7L5N1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
COPS6Q7L5N1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
COPS6Q7L5N1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.08■■□□□ 1.77
COPS6Q7L5N1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
COPS6Q7L5N1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
COPS6Q7L5N1 HES2-205ENST00000487437 968 ntTSL 3 BASIC26.08■■□□□ 1.77
COPS6Q7L5N1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.08■■□□□ 1.77
COPS6Q7L5N1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC26.08■■□□□ 1.77
COPS6Q7L5N1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
COPS6Q7L5N1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.76
COPS6Q7L5N1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 GCSHP5-201ENST00000443090 522 ntBASIC26.07■■□□□ 1.76
COPS6Q7L5N1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.07■■□□□ 1.76
COPS6Q7L5N1 UNC93B4-201ENST00000505679 747 ntBASIC26.07■■□□□ 1.76
COPS6Q7L5N1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 C2orf69P4-201ENST00000565394 541 ntBASIC26.07■■□□□ 1.76
COPS6Q7L5N1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COPS6Q7L5N1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COPS6Q7L5N1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
COPS6Q7L5N1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COPS6Q7L5N1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
COPS6Q7L5N1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC26.06■■□□□ 1.76
COPS6Q7L5N1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC26.06■■□□□ 1.76
COPS6Q7L5N1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COPS6Q7L5N1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.06■■□□□ 1.76
COPS6Q7L5N1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
COPS6Q7L5N1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
COPS6Q7L5N1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COPS6Q7L5N1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COPS6Q7L5N1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.06■■□□□ 1.76
COPS6Q7L5N1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
COPS6Q7L5N1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.05■■□□□ 1.76
COPS6Q7L5N1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COPS6Q7L5N1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COPS6Q7L5N1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COPS6Q7L5N1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC26.05■■□□□ 1.76
COPS6Q7L5N1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COPS6Q7L5N1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.05■■□□□ 1.76
COPS6Q7L5N1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COPS6Q7L5N1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.05■■□□□ 1.76
COPS6Q7L5N1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.05■■□□□ 1.76
COPS6Q7L5N1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COPS6Q7L5N1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC26.05■■□□□ 1.76
COPS6Q7L5N1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
COPS6Q7L5N1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COPS6Q7L5N1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COPS6Q7L5N1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COPS6Q7L5N1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COPS6Q7L5N1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.04■■□□□ 1.76
COPS6Q7L5N1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COPS6Q7L5N1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.04■■□□□ 1.76
COPS6Q7L5N1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.04■■□□□ 1.76
COPS6Q7L5N1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
COPS6Q7L5N1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COPS6Q7L5N1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COPS6Q7L5N1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
COPS6Q7L5N1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COPS6Q7L5N1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COPS6Q7L5N1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
COPS6Q7L5N1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC26.03■■□□□ 1.76
COPS6Q7L5N1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms